| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0124 |
|---|
| Symbol | |
|---|
| ID | 3230887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 128807 |
|---|
| End bp | 131026 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637291486 |
|---|
| Product | OMP85 family outer membrane protein |
|---|
| Protein accession | YP_178148 |
|---|
| Protein GI | 57237136 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATCTTATTAG TATTTGTGCT TTAGTTGCTA TGGCCAATGC AGCAACCATT
AAAGATATTA AATTTATCGG ATTAAATCAT TTATCGAACA CAAGCGCTAT AAATATCGCG
GGGCTTAAAA TAGGCGAGGA AATAAATCCT GCAAAAATCA ACACTGCTAT TCTTAATCTT
TATAAACAAA ATTATTTCGA AAATATTGCA GTAGAAAACA ACAATGGAAT TTTGGAAATT
ATAGTTACTG AAAAACCAAC TATAGCAAAG GTTAGTATAA CAGGTATAGC TTCCAATGAT
AGAAAACAAG TTGAAAGTAT TTTAGGGATT AAAAGAGGTA CACTACTTGA TGAAGGAAGT
ATAAAAGAAG CTATTGAACG CATTAAAGCT TATTATGAAG CAAAAAGTTA TTTTGATACT
ATTGTAGAAT ACAAAAAAAA GACTTTAGAA AATACTGATG GACTAGAGCT TGAATTTATA
GTAAATCGTG GTGAAAATAT CATTATTGAT AATGTTCATT TAAGTGGAGC AAAGAAATTT
TCATATTCTG ATATAGAACC TGCTGTTGTT AACAAAGAAA AAGAATTTAT GGGATGGATG
TGGGGACGCA ATGATGGAAA ATTAAAAGTT TTTGAACTTA GTAACGATAG TTCAAGAATT
GCTGATGAAT ATATGAAAAA AGGATATTTA GATGTTCAAG TATCCTCCCC TTATCTTAAA
ACCTACACAG ATACTTATCA AGCAAATTTG ACTTATTTTA TCAAAGAAGG AAAGCCTTAT
AAAATTAAAA GTATAAGCAT AGAAAATCCT TTATTTGATG ATAAGCAAAA TGCACAAACC
GTAAAAGATT TAAGATCAAG CGCTGGCAAA ACTATCAATA TCGAAGACAT TAGAAAAGAT
GTTAAAACCA TAGAAACACA AAGTGCTGAT TTGGGTTATG CGTTTGTAGA AGTCTATCCT
GATATTCAAA AAAATGATCA AACTCAAGAA GCCACCGTTG TATTTAAAGT AATCCCTCAC
GATAAAGTTT ATATAAGAAA TGTTATTATT TCAGGAAATT CACGCACCGT AGATCGCGTC
ATACGCCGAG AATTATATAT AACAGAAGGT AATTTATACA ATAGAACAGA CTTAAGCGAG
TCAAAAAATG CTTTAAAAAG AACTTCTTAT TTTGACGATG TAAATATCAA AGAAGAAAAA
GTTGATAATA CACATATTGA TTTGATTGTT GATGTTAAAG AAGCTTCTAC AGGAGCTATT
TCTGGAGGCA TTGGCTATGG ATCAAGCGAT GGTATTTTGC TTAACGCTTC TTTATCGGAT
ACAAATATCT TTGGTTCAGG AATAAAAAGC TCTGTAAGCG TAGATAAAAG CGATGATACT
TTATCGGGAA GGATTAGTCT CGTAAATCCA CGCGTTCTTG ATAGTCAATA TAGTCTGGGT
GGAACACTTT ATTCAAATGA CTATGAATGG GATAATTATT CAGAAAAAAA TTACGGCTTT
GATATAACAG TTGGACGCCA ATTTGCAAGA TACTATAATG TAAGCTTAAC TTATAATCTT
GAACAAAGCG ATATATATCA CTTAAGTCCA ACTCTTTTAA GAACAGGATA TGAACTTGGC
AAAAGTATTA AAAGCTCTAT AACTCCAGCA ATCACCTTTA ACAATACAGA TGATTATTAT
CTGCCACGAT CAGGTATTAT TGCTTCAACT AGTTTAGAAT ACGCTGGACT TGGCGGAGAT
CAAGAATTTA TTTCATCAAG CTCTAAATTT AACTTTTATC AAGGTTTGCA AGACTATATA
GGATATGATC TTATTTATCG CTATAAAGCG AGTTTTTATA AAGTATGGGA TGAAGGTTAT
TTACCAATTA ACCAAAGAAT TTATTTAGGT GGTATTAGAT CGATACGCGG TTTTGAAAGC
AGAACAGTAA GTCCTAAAAA TCAATGGGGA GATGAAGTAG GTGGAACTAT AGCTTTTGCC
AATTCCGTAG AACTTAGTTT TCCTTTGATT GATAGAATCA AACTTCGTGG TAGCGTGTTT
TTTGATTATG GTATGATAGG GCGTAAAAAT TTAGATGAAA TAAAAAGAAT GAGTACAGGT
ATAGGCATTG AATGGATTAC ACCTATTGGA CCTTTACAAC TTGTATTTGC CAAACCTCTT
AATGATAAAA AAGGTGATGA TACTAATAGT TTTGAATTTA ATCTTGGAAC ACGCTTTTAA
|
|---|
| Protein sequence | MKKHLISICA LVAMANAATI KDIKFIGLNH LSNTSAINIA GLKIGEEINP AKINTAILNL
YKQNYFENIA VENNNGILEI IVTEKPTIAK VSITGIASND RKQVESILGI KRGTLLDEGS
IKEAIERIKA YYEAKSYFDT IVEYKKKTLE NTDGLELEFI VNRGENIIID NVHLSGAKKF
SYSDIEPAVV NKEKEFMGWM WGRNDGKLKV FELSNDSSRI ADEYMKKGYL DVQVSSPYLK
TYTDTYQANL TYFIKEGKPY KIKSISIENP LFDDKQNAQT VKDLRSSAGK TINIEDIRKD
VKTIETQSAD LGYAFVEVYP DIQKNDQTQE ATVVFKVIPH DKVYIRNVII SGNSRTVDRV
IRRELYITEG NLYNRTDLSE SKNALKRTSY FDDVNIKEEK VDNTHIDLIV DVKEASTGAI
SGGIGYGSSD GILLNASLSD TNIFGSGIKS SVSVDKSDDT LSGRISLVNP RVLDSQYSLG
GTLYSNDYEW DNYSEKNYGF DITVGRQFAR YYNVSLTYNL EQSDIYHLSP TLLRTGYELG
KSIKSSITPA ITFNNTDDYY LPRSGIIAST SLEYAGLGGD QEFISSSSKF NFYQGLQDYI
GYDLIYRYKA SFYKVWDEGY LPINQRIYLG GIRSIRGFES RTVSPKNQWG DEVGGTIAFA
NSVELSFPLI DRIKLRGSVF FDYGMIGRKN LDEIKRMSTG IGIEWITPIG PLQLVFAKPL
NDKKGDDTNS FEFNLGTRF
|
|---|
| |