| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0118 |
|---|
| Symbol | dusB |
|---|
| ID | 3230881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 124510 |
|---|
| End bp | 125436 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637291480 |
|---|
| Product | tRNA-dihydrouridine synthase B |
|---|
| Protein accession | YP_178142 |
|---|
| Protein GI | 57237130 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATT TTAGCAAAAA ACCCCTGTTT TTAGCCCCTA TGGCAGGTTT TTCAGATCTG
CCTTTTCGTA ATGTAGTAAA AAAATTTGGT GCTGATATTA CCATAAGTGA AATGATAAGT
TCTAATGCCT TAGTTTATGA AAGTTCTAAA ACTTTACATA TGCTAGAAAG AGCTGAATTA
GAAAATCCCT ATATAGTCCA AATTGCAGGT GGAGATAAAG AAGTGCTAAA AAAAGCAGTG
CAAATGCTAA ATGAAATGGA TTTTGTAGAT GGGATCGATT TTAATTGCGG TTGCCCTGTA
AATAAAGTTG TTAAACAATG TGCTGGCAGT GCTTTGCTAG AAAATTTAGA GCTTTTTAAA
AATCTTGTAG GAGTGATTAA AGAAAACAAT AAAAAAAGCC TTACAAGTGT GAAATTTCGA
CTAGGATTTA ATGAAAAATA TCCTGAAAAA ATGGCTAAAA TTTGTGAAAG CTTGGGGGTG
GATTTTATAA GTATCCACGG ACGCACAAGA AAACAGCTTT ATAGCGGAAA AGCCGATTAT
GGATCCATTG CTAGTGCTAA AGCGAGTGTG AAAATTCCTG TGATTGCAAA TGGCGATATT
AACGCACAAA ACGCTAAAGA AGTTTATAAA ATCACAAAAT GTGATGGACT CATGATAGGG
CGTGCAAGCG TAGGAAATCC TTGGATATTT TATGAAATCA AAAGCGGTAA AAGTGTAGAT
GAAAAACTCA AAAAAGAAAT CATACTCACT CATTTTGATG AAATGATAAA ACACTACAAA
GATCAAGGCG TAAGTATATT TCGCAAGCAT TTACACGAGT ATTCTAAAGG GCATAAAGAC
GCTTCAGCCT TTAGAGATAC CGTTAATCGT ATCGACAATG TCGAAGAAAT GCGAAAAAAA
ATAGAAGAAT TTTTTAGTTT AACTTGA
|
|---|
| Protein sequence | MIDFSKKPLF LAPMAGFSDL PFRNVVKKFG ADITISEMIS SNALVYESSK TLHMLERAEL
ENPYIVQIAG GDKEVLKKAV QMLNEMDFVD GIDFNCGCPV NKVVKQCAGS ALLENLELFK
NLVGVIKENN KKSLTSVKFR LGFNEKYPEK MAKICESLGV DFISIHGRTR KQLYSGKADY
GSIASAKASV KIPVIANGDI NAQNAKEVYK ITKCDGLMIG RASVGNPWIF YEIKSGKSVD
EKLKKEIILT HFDEMIKHYK DQGVSIFRKH LHEYSKGHKD ASAFRDTVNR IDNVEEMRKK
IEEFFSLT
|
|---|
| |