Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0065 |
Symbol | sppA |
ID | 3230828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 80049 |
End bp | 80945 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637291428 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_178090 |
Protein GI | 57237078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.78277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TAAAATCATT TTTTAAGGCT TTAGGATGCG GTATAAAATT TATCAATACT TATTTTAAAA CCTTTGTTTT ATTGTTGATT GTTATATGGA TTTTAATGCC TAGTGCAAAT TCAAGCTCCA ATCTTGCAAA TTTAGAACGC ATTGATTTAA AGGGTGAAAT TTTTGACAGC TCTGCGGTTT TGGAAAAAAT TATCAATGCT AAAAATGATA GCAATATTAA AGGAGTGCTT TTTGTTATAG ACTCTCCTGG TGGAGCTTTT GCTCCTAGTA TGGAACTAGC TCTAGCTATA AAGGATTTAA AAATTAAAAA GCCTGTGCTT GTTTATGCAA GCGGAACTAT GGCAAGCGGA AGTTATTTAG CAGGAGTTGG AGCTAATAAA ATTTTAGCCA ATCCAGCAAG TTTTATAGGC TCTATCGGTG TGATTATGCA AGGAGCTGAT TTAAGCGGAT TGGCTAATAA ACTCGGTATT AAAGAACAAA CTATTCAAGC GGGTGAATTT AAAAGTGCTG GAACTTTTGC AAGAGCTTGG AATGAGAATG AAAGAAATTT TTTACAGGGT TTAATTGATC AAAGTTATGA TCTTTTTACA GGTTTTGTTG TCAAGGAAAG AGCATTAGAT CTTAATAAAA AAGATCAATG GGCAAATGCA AGAGTGTTTT TAGCTGCCAA GGCTAAGGAG CTTGGTCTTA TAGATGAGCT TAGTAATTAT GAAAATGCTA AAAAGGAGCT TGAAAAACTT GCTAATGTTT CAAATCCTGT TTGGAAAGAA GAAGATAAGA TTGATAAATT TCTTAACCGC CTAGAAGGAC AAACATCAAG CTTGATAAGT AAAAGCTTAA TCGAAATCGC TTATAAAACT AATAGCAGTT TTATAAACGC TAGATAA
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Protein sequence | MQILKSFFKA LGCGIKFINT YFKTFVLLLI VIWILMPSAN SSSNLANLER IDLKGEIFDS SAVLEKIINA KNDSNIKGVL FVIDSPGGAF APSMELALAI KDLKIKKPVL VYASGTMASG SYLAGVGANK ILANPASFIG SIGVIMQGAD LSGLANKLGI KEQTIQAGEF KSAGTFARAW NENERNFLQG LIDQSYDLFT GFVVKERALD LNKKDQWANA RVFLAAKAKE LGLIDELSNY ENAKKELEKL ANVSNPVWKE EDKIDKFLNR LEGQTSSLIS KSLIEIAYKT NSSFINAR
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