Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_5046 |
Symbol | gidB |
ID | 3518967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5364821 |
End bp | 5365450 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637287485 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_271684 |
Protein GI | 71278438 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.27505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAT CACAGCAATT ATCGACACTG ATTAGTAAAA CGCAGCTTGT CGTATCTCAA GAACAAATCG ATTTACTTAT TCAATACGTT GAGTTACTCA ATAAATGGAA TAAAGCATAT AACCTAACTT CTGTTCGTGA TCCTAGTGAA ATGCTAGTTA AACATATTAT GGATAGTTTA ATGGTGGGTG AAGTGCTTAT AGGTAAGAAC TTTATTGATG TTGGAACGGG TCCTGGTTTA CCTGGCATAC CATTAGCTAT TTTGTATCCA GAAAGAAATT TTGTTTTACT AGACAGTCTA GGTAAACGTA TTACTTTTCT TAGACAAGTG GTTTTTCAAT TAAAGCTTAG CAATGTGACA CCAGTGAAAG CAAGGGTTGA AGAGTATCAA GGTGAGGAAC CTTTTGATGG GGTATTAAGT CGTGCCTTTT CTTCTCTGAA TGATATGGTA AGCTGGTGTA AGCACTTAAT TACCACTGAG CAAGGACGAT TTTTTGCACT CAAAGGGCAA TATCCTCAGG ATGAGATCTC ACAATTACCT GAAAATATTA CTTTAGTAGA TAGTCATGAA ATTATCGTGC CTGACTTGGT TGGTGAACGC CATGTAATAG TACTGAAGAA GTTGCACTAG
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Protein sequence | MTLSQQLSTL ISKTQLVVSQ EQIDLLIQYV ELLNKWNKAY NLTSVRDPSE MLVKHIMDSL MVGEVLIGKN FIDVGTGPGL PGIPLAILYP ERNFVLLDSL GKRITFLRQV VFQLKLSNVT PVKARVEEYQ GEEPFDGVLS RAFSSLNDMV SWCKHLITTE QGRFFALKGQ YPQDEISQLP ENITLVDSHE IIVPDLVGER HVIVLKKLH
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