Gene CPS_5034 details

Gene Information

• Locus tag: CPS_5034
• ID: 3519982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 5354147
• End bp: 5354908
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637287473
• Product: hypothetical protein
• Protein accession: YP_271673
• Protein GI: 71279523

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.957713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATA AAGTTTTATT AAGTTTACTA CTCTCAGCAA TAGGTACTTA TTCTGCATGT 
GTATCTGCCG ACGAATGGAG TTATCAACTA GAGCCCTATT TAATGGTCAC TTCTATTAAA 
GGTGATGCAA CAATTGGTCG TACTAATACA GCTGATGTGG ATGTTGATTT TGGAACCATA 
TTAGATAACT TAGACGCTGC GGCTATGGTT CATTTTGAAG CTCATCATGA CTCAGGTTGG 
GGGGTTATGT TTGATTATGG CTTTATGGAT CTTGGTGGAG ATAAAACTAA TGACAATGGC 
AACTCTACTG ATGTTAGTGT TCGACAAGGC GTACTTGAAC TTCATGCCTT ATACCGAAAT 
AAATTGAATG ATGGATTTCT TGATTACTTT GCCGGTGTTA GGTGGTGGGA TAACGATATA 
GACGTAACGC TTGATTTTGC AATTCGCCCT GAAAAAAATT TTGAAAAAGA GGTTGAGGCT 
GATTGGATAG ACCCTGTCAT TGGTGTTAGG TGGATAAAAA ATATCGATGA TAAGTGGATG 
TTTTTAGCTC AAGCAGATGT AGGCGGTTTT GGTCTTGGGT CTGACTTTAC TTCTTCTGTT 
CAAAGTGGCG TTATGTACAA AATCAGTGAT TTAATGACTT TGGATCTTAA ATATAAAGCG 
ACTTGGGTCG ATTATGAAGA AGGTAGGGCA GGACAAGATG GATATTTTGG TTATGACACA 
GTGACTCATG GCACTGTGAT TGGCCTAGCT TTTAATTTCT AA 

 

Protein sequence

MKNKVLLSLL LSAIGTYSAC VSADEWSYQL EPYLMVTSIK GDATIGRTNT ADVDVDFGTI 
LDNLDAAAMV HFEAHHDSGW GVMFDYGFMD LGGDKTNDNG NSTDVSVRQG VLELHALYRN 
KLNDGFLDYF AGVRWWDNDI DVTLDFAIRP EKNFEKEVEA DWIDPVIGVR WIKNIDDKWM 
FLAQADVGGF GLGSDFTSSV QSGVMYKISD LMTLDLKYKA TWVDYEEGRA GQDGYFGYDT 
VTHGTVIGLA FNF