| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5026 |
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| Symbol | |
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| ID | 3520868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5341158 |
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| End bp | 5342744 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637287465 |
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| Product | chain length determinant family protein |
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| Protein accession | YP_271665 |
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| Protein GI | 71280402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATA TATTTGAAGA GATAATTGAT TATCTAAAAG GAATTTGGTT AAAACGTCGT
TATATCATCA TAGCAACTTG GCTTATTTGC CCTATTGGCT GGTATTTCGT TGCTGCTATG
CCCAATGTTT ATCAATCAGA AGCAAGAGTA TATGTTGATA CCCAGTCTTT ATTGCGGCCT
TTATTAAAGG GTTTAACCGT CGAAACCAAT CCTGATACGC AAATTCGTCT TATGGTAAAA
ACACTATTAA GCCGTCCGAA TTTAGAGCGT ATCTCGCGTA TGACAGATTT AGATGTACAG
GCTAGCACTC CTGCTCAATA TGAAGCAATA ATCAAAAACC TAAAAGATAA CATTAAAATA
TCAAGCGCTC GCCGAGAAAA CATTTATACC TTAAGCATTG AAGATGAAGA TCCTGAAATG
GCAAAAAACA TAGTTCGCTC AGCGTTGACT GTTTTCATTG AAAATACTTT AGGCGAAACT
CGAAGTGACT CAGATAGTGC GCAAAAGTTT TTAAATACTC AAATCAAAGA TTATGAAAAC
CGCCTGTCAA ATTCAGAAGC CCGACTGACG AGTTTCAAAC AAAAGTATAG TGGTATTTTA
CCTGATCAAT CAGGTGGCTA TTATGCAAAG CTCAATGGTA ATAGAGAAAA ATTAAAAGCA
ATTGAGTTGG ATCTTTTGGA GAATAAAACC CGTCTTGATT CCGCTAAAAA GCAGCTAGCC
CAATCCGTAG TAGCTGACAC TGGAAGTGAT AACAAAATTA AAAGTGAAAA TTCAATACAA
ACTACTTATG ATGACCGTAT AAATGAATTA GAAGTTCTAC TGGATAATTT AAAGCTTCGT
TATACCGAGA AACACCCAGA TGTGATCGAA ACTAGCCGAA ATTTAGAACA TTTAAATAAA
TTGCGTAGCT CTGAAATTGA AAAGTATCTA GCACAAAATA ATGAGAACAC TGGCAGTTTA
AAACGCTTAA GTGCTAATCC CGTTATTCAA GAAGTACAAA TTCATGTTAA TCAACTGGAG
AATTTGATTG CTTCACTCAA TGTTAGAGCT GACAATTACC GCCAACGCAT TATCGAACTT
GAAAATAGAG TCCATACTTT ACCGGAAATT GAGGCTGAGT TAATCGCACT AAACCGTGGA
TATGGTATTA CCAAAGAAAA GTACGAAGAG CTGTTATCAC GTAAAGAAAC TGCACAACTG
GCTCAACAAG CCGATGAAAC TACTGATAAA ATTCAATTTC GTGTTATTGA CCCACCACGT
AAAGCAACTA AACCCTCAGG GCCAAAGCGC TTTCTTTTAT TTGGTGTCGT CACTCTTATA
GGGTTTGCTG TTGGCATTGG TTTGTCATTA TTAATGAGTC AATTGAACCC TGTAGCAACC
TCTACCGCTC AATTATCTAA AATTACCGGC GTACCTATTT TTGGTGTTAT CTCTGCCAAT
GAAAACTTAG GTTTACAACA ATGGCATAAA AAGAAAACTT TCATTTTTAT AGGCTCTAAC
GTGCTATTAC TCTGCTTGTT AGTGTTATTT GTTAGTTACT TTTTATTTCC TGATACTATT
CAAGCACCAT TAAAAAGGAT ATTTTAG
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| Protein sequence | MQDIFEEIID YLKGIWLKRR YIIIATWLIC PIGWYFVAAM PNVYQSEARV YVDTQSLLRP
LLKGLTVETN PDTQIRLMVK TLLSRPNLER ISRMTDLDVQ ASTPAQYEAI IKNLKDNIKI
SSARRENIYT LSIEDEDPEM AKNIVRSALT VFIENTLGET RSDSDSAQKF LNTQIKDYEN
RLSNSEARLT SFKQKYSGIL PDQSGGYYAK LNGNREKLKA IELDLLENKT RLDSAKKQLA
QSVVADTGSD NKIKSENSIQ TTYDDRINEL EVLLDNLKLR YTEKHPDVIE TSRNLEHLNK
LRSSEIEKYL AQNNENTGSL KRLSANPVIQ EVQIHVNQLE NLIASLNVRA DNYRQRIIEL
ENRVHTLPEI EAELIALNRG YGITKEKYEE LLSRKETAQL AQQADETTDK IQFRVIDPPR
KATKPSGPKR FLLFGVVTLI GFAVGIGLSL LMSQLNPVAT STAQLSKITG VPIFGVISAN
ENLGLQQWHK KKTFIFIGSN VLLLCLLVLF VSYFLFPDTI QAPLKRIF
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