Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_5023 |
Symbol | |
ID | 3519207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5338866 |
End bp | 5340269 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637287462 |
Product | sugar transferase domain-containing protein |
Protein accession | YP_271662 |
Protein GI | 71279278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGTT CGAAATTTCG TGATTTATCA GCAGGTACTA AATCTTTAAT TATTGTAGAA CAAATCTTAT TTGTTGGAGC TTTGATTTTA GCTGTTCATT TGAACGGGGA ATATCAAATT GTTGATTTTA TAGTGGTATC TGATGGTTTC TTATTACTCT ATGCTGTTAT TTTTGCCCTA TTTAATCAAT TAAGTGCCTT AGCGCTAGGA TTGTACAACT CAAAACTGAG AGAAAGTTTT CGAGGGATTT TTCGTCGCAT GTTGATGTGT GTCTCTATCG GGTTTTGTGC GACAACACTC ATTAATCCTT TTTATGGGGT TTATCATTTA CCAATAGAAT TATTGGCTAT CGCCTCTTCA CTTAGTGTTT TTCTAGTCAG TTCTTTTCGC TATTTTACCT TTAAAATAGA TTTCTTTGGT TTTGGCAAAC GTAATATTTT GGTATTAGGC TCTGGACAAC GAGCATCAAT TATAGAAAGG CGTATGCGAC GTGATGTTGA TCGGCAAGAC TTCACTGTGC ATGGTTTTGT TATCATGGAA GGTGATTCAG CTGATGGGAT TCAGCATGAA ATACGCATCA AGCTAAATGA ATCATTAGTT GAATACACCT TAGCCCATGA TATTGATGAG ATAGTCGTCG CTAATGACGA GCGTCGTAAT AACTTGCCTG TAGATGAGTT GTTTGCTTGC AAGATCCGCG GTATTGAAAT TATAGATATA TTGGATTTCA TTGAGCGTGA AACCGGACAA ATAGCCGTTA ACCTTATTTA TCCTAGCTGG GTCATTTATT CTAATGGCTT CGCCTCTAAT AATTATTTAC GTAATACCTT AGATTGGATC TTTAATGCAG GAATGGCACT GATCTTGTTA TTACTTACTT GGCCGGTGAT GCTTATTACT GCGTTGTGTA TGAAGATCAC CGAAGGTCTT AATGCGCCAA TCTTTTATAA ACAAGAGCGG GTTGGCTTAG ATGGTGAACT GTTTAATATG ATCAAATTTC GTAGTATGCG TTTAGATGCA GAAAAAAACG GTGCCCAAAT GGCAAGCGAA AACGATAACC GTATTACAAA AGTCGGTCAG TATTTACGTA AATATCGTAT TGATGAACTG CCACAAATTT GGAATGTTTT GCATGGTAGT ATGGGTTTTG TTGGACCAAG ACCTGAACGA CCTCAATTTG TGAAAAGCCT TATTAATAAT ATCCCTTATT ATAACGAACG TCATAATGTT AAACCAGGTT TAACCGGTTG GGCGCAATTA AAATACCCTT ACGGCGCTAC GGAGGCTGAT TCTTTAGAAA AGCTGAAATA TGATTTGTAT TATATTAAGC ACCGTAGCTT TCTCTTGGAT TTATTGATAT TAATTCGAAC GTTTGAAATT GTGTTATTTG GTAAAGGAAG ATAA
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Protein sequence | MSSSKFRDLS AGTKSLIIVE QILFVGALIL AVHLNGEYQI VDFIVVSDGF LLLYAVIFAL FNQLSALALG LYNSKLRESF RGIFRRMLMC VSIGFCATTL INPFYGVYHL PIELLAIASS LSVFLVSSFR YFTFKIDFFG FGKRNILVLG SGQRASIIER RMRRDVDRQD FTVHGFVIME GDSADGIQHE IRIKLNESLV EYTLAHDIDE IVVANDERRN NLPVDELFAC KIRGIEIIDI LDFIERETGQ IAVNLIYPSW VIYSNGFASN NYLRNTLDWI FNAGMALILL LLTWPVMLIT ALCMKITEGL NAPIFYKQER VGLDGELFNM IKFRSMRLDA EKNGAQMASE NDNRITKVGQ YLRKYRIDEL PQIWNVLHGS MGFVGPRPER PQFVKSLINN IPYYNERHNV KPGLTGWAQL KYPYGATEAD SLEKLKYDLY YIKHRSFLLD LLILIRTFEI VLFGKGR
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