| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4997 |
|---|
| Symbol | |
|---|
| ID | 3521066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 5312015 |
|---|
| End bp | 5313013 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637287436 |
|---|
| Product | endonuclease/exonuclease/phosphatase family protein |
|---|
| Protein accession | YP_271636 |
|---|
| Protein GI | 71280598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.424253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT ATATGTGGGA TAAAATAAAA AATAACTTTC ATTATTTTGT TAACTTTTAT
TTTATCGCGT GTTGCCTCGC ATGTGCGCTT GTTACCCTGC TTCCTTGGTG GCCTTCAACT
ATTTTTCTTG TTATTCCTAA ATATATTTTA TTATTTGCAC CACGAAGGTT ATTATTTCTA
GCCTTATTGG TTTTATTGTT TTTGTGGAAT AATCTTTCAA AAATTCAAAA GTATTCTTTA
CCTTTATTAT TCTTTATTTC AATTAAATAT TTAGATTTCG GGATGAATTT TAATCCAAAT
AATATTGTGG AAGAGCATAA AATAGTTAAG ATTATTACAG CCAATATTGG TGAAGGTGGG
CAAGTAAAGA AAATAAAATT GTTATTGAAA TATTACCAAC CTGATATTTT ACTTTTACAG
GATGCTAATA GCATTTCTCT AAAAAAAATA GATATTGATT ACATGTTTTT CGAATGTGTA
GGTGAATTAT GCATATTAAG CAAGCATCCT TTTGAACGAA CAAACCAACT AAGCAGAGCT
TTAGTGGGGG GGTGGGGGAA TTTTGCAGTT TTTTATAAGC TATACCTAGG TGAGAATACC
CTTAATATTG CTAATGTTCA TCTACAATCT GTACATTCAT TGTTAGTTGA TATACAGAAA
GGTAGTGTTA ATTTTTCAGA TATTGTACAA CTTGAAGACA ATAAGCGTAT TGAAACTGGA
ATTCTAAGTT CTTGGATAAA ATACGAACCT TATTCCCTTA TTGTGGGGGA CTTTAATATG
CCAATTGAAG AGAATATATA CCAAGAAAAT TTTTCAATGA TAAATAATGC ATTAAGTGAT
GTTGGGATTG GTTTTAACGA TACAATACGA ATAGATGGTT TAAGTCTTAG AATAGATCAT
ATTTTATTTA GTAACCAATT TGATTTAATT GATGCTCAAG TTATCGAGTC ATTAGGGGGA
GATCACTTAC CTGTAATGGT AAGTTTAATT ATTAAGTAG
|
|---|
| Protein sequence | MKNYMWDKIK NNFHYFVNFY FIACCLACAL VTLLPWWPST IFLVIPKYIL LFAPRRLLFL
ALLVLLFLWN NLSKIQKYSL PLLFFISIKY LDFGMNFNPN NIVEEHKIVK IITANIGEGG
QVKKIKLLLK YYQPDILLLQ DANSISLKKI DIDYMFFECV GELCILSKHP FERTNQLSRA
LVGGWGNFAV FYKLYLGENT LNIANVHLQS VHSLLVDIQK GSVNFSDIVQ LEDNKRIETG
ILSSWIKYEP YSLIVGDFNM PIEENIYQEN FSMINNALSD VGIGFNDTIR IDGLSLRIDH
ILFSNQFDLI DAQVIESLGG DHLPVMVSLI IK
|
|---|
| |