| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4978 |
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| Symbol | polA |
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| ID | 3519378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5288747 |
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| End bp | 5291557 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287417 |
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| Product | DNA polymerase I |
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| Protein accession | YP_271617 |
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| Protein GI | 71279137 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTT CTGCAACCAC CCAAGACTCT AATAACTCGC AATCACCCTT AATATTGGTC
GATGGTTCAT CGTATTTATT TCGAGCCTAT CACGTACCTT ATTTGCAAGC TCTTTCAACC
GCTGATGGTC AACCTACGGG AGCTATTACT GGTGTATTGA ATATGTTTCG TAGTTTAAAA
AAAGACTACC CCAATGGCAA TATCATCGCT ATTTTCGATG CTAAAGGTAA AACATTTCGT
AATGACATGT TTCCCGAATA CAAAGCCAAT CGTCCACCAA TGCCTGATGA TTTACGTACT
CAAATTGCAC CAATACATGA GATTATTACA GCAATGGGTT TGCCACTTTT AGTTATTCCG
GGTGTTGAGG CCGATGATGT TATTGGTACA TTGGCAAAAC AAGCTGATGA GCTTGGTATT
GAAACCGTTA TTTCGACCGG CGATAAAGAC ATGGCGCAGC TTGTTACTAA GCATGTTCGT
TTGATTAATA CCATGACCGA TGTAGAAATG GATGTTGCTG GCGTTAGTGA AAAGTTTGGT
GTTAGACCTG ATCAAATTAT CGACTATCTT GCATTAATGG GGGATAAAGT TGATAACATT
CCTGGCGTTG TTAAGTGTGG TCCCAAAACT GCCGTTAAAT GGTTAGCAGA ACATGGCACC
ATGCAGGAAG TTATTGCCAA TGCGGACAAA GTAAAAGGCA AGATTGGTGA AAATCTTCGT
GATGCATTAG AACAACTGCC ATTGTCTTAT CAATTAGCCA CTATTAAATG TGATGTTGAA
TTAGAACAAA CGGCTGGAGA ATTAGCGGCT AGTGAACCAG ACGTAGACGC ATTAGCTGAA
CTTTATCAAA AGTTCGAACT AAAACGTTTG TTAGCTGACT TAGGTAAAGG TGGAAGTGAC
GTTGGCGCGA GCACTAGTAG CGTAGCTAAA AAAACTAAAG CAGACTCTAC AGCTTCGGTG
GGCGAGCAGG CCGTTGAAAT TAAAGCTGTA GACGTTGAAA AAACTCAATA CGATATTATT
TTAGACAAAG AGCTTTTTGA ACAGTGGTTG AAAAAGTTAC AAGCGTGCGA GTCTTTTGCT
TTTGATACTG AAACCACTAG TGTTCATTAT ATGAAGGCTG AACTAGTCGG AGTATCGTTT
GCTATTGAAG TGGGGAAAGC TGCTTATGTA CCATTGACTC ATGATTATGA AGATGCCCCT
GAGCAACTTG ATAAAGAGTG GGTATTAGCG CAATTAAAAC CGTTACTCGA AAGTAAAACC
ATTAAAAAGA TTGGTCAAAA TCTTAAGTAT GATGCCAATG TATTAAGCCA TTATGATATT
GCTTTGCAAG GCATCGAGTT TGATACCATG ATCGAGTCTT ATTGTTATAA CAGTGTTGCT
ACCCGACATA ATATGGATGC ATTAGCACTG AAATATCTTG ATTATCAAAC CGTGCATTTT
GAAGATGTAG CAGGTAAAGG TGCTAAACAA CTTACTTTCA ACCAAATTGA CATTGAAAAA
GCGGGTCACT ATGCCGCGGA AGATGCGGAT ATCACCTTGC GATTACATCA CGCTATTTTC
CCCGCGTTAG CAGAAACCGC TTCAATGTTA AGTGTTTTCA ATGAAATCGA GATGCCATTA
TTACCTGTAC TGGCCCGCAT GGAGCAAACC GGTGTATTAA TTGATAGTGA TATCTTAGCT
GAACAAAGCT TTACCCTAGG TCAGCGTTTA GATGAACTAG AAATTGAAGC ACATAATTTA
GCAGGTAAAA GCTTTAACTT GGCATCACCG AAGCAATTAC AGCAAATTCT TTTTGAAGAT
TTAAAAATCC CGGTCATCAA AAAGACACCC AAAGGTGCTC CTTCAACAGC AGAAGAAGTA
TTGCAAGAGT TAGCGCTCGA TTACCCATTA CCCAAGGTTA TTTTGGAAAA TCGAGGACTT
AGTAAACTGA AGTCGACGTA CACCGACAAG TTACCATTAA TGGTGAGCGA TAAAACTAAT
CGTTTGCATA CTTCGTATCA TCAGGCGGTT ACGGCAACAG GGCGTTTATC TTCAACCGAT
CCAAACTTGC AGAACATTCC AATTCGCAGC GAACAAGGCC GCAAAATTCG CCAAGCTTTT
ATTGCACCAA AAGATCATAA AATAGTCGCG ATAGATTACT CTCAAATTGA ATTACGCATA
ATGGCACATT TGTCGAACGA TAAAGGTTTA GTCACTGCCT TTAGCGAAGG TAAAGATATC
CATCGCGCGA CAGCGGCAGA AATCTTTGCT GTTGAACTTG GTGAGGTTAC TACCGATCAA
CGACGTAGTG CTAAAGCTAT TAACTTTGGT TTAATTTACG GTATGTCAGC ATTTGGTTTA
GCCAAGCAGC TCCATATTGG TCGTCAGCAG GCGCAAGAGT ACCAAGATAA ATATTTCCAG
CGTTACCCTG GTGTATTAAC GTATATGGAA GATACTCGTC AACAAGCGAG TGAGCAGGGC
TATGTTGAAA CCTTATATGG TCGTCGATTA TATCTACCTG ATATTAATGC TAAAAATGGT
ATGCGTAAAA AAGCGGCCGA GCGAGCTGCA ATCAATGCAC CGATGCAAGG AACCGCTGCG
GATATTATTA AAAAGGCCAT GTTAGCCGTA GATTCATGGT TACTTGAGCA AAATGATGAC
CGTATAAAAA TGACTATGCA AGTTCACGAT GAACTGATTT TTGAAATTCA TCAAGATATT
GTTGAAGAAA CCACAGCTAA ATTGGTGACG TTAATGAATG ATGCGGTAGA GCTGAGTGTG
CCATTAATTG CAGAGGCTGG CATTGGCGAT AACTGGGATG AGGCGCATTA A
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| Protein sequence | MTISATTQDS NNSQSPLILV DGSSYLFRAY HVPYLQALST ADGQPTGAIT GVLNMFRSLK
KDYPNGNIIA IFDAKGKTFR NDMFPEYKAN RPPMPDDLRT QIAPIHEIIT AMGLPLLVIP
GVEADDVIGT LAKQADELGI ETVISTGDKD MAQLVTKHVR LINTMTDVEM DVAGVSEKFG
VRPDQIIDYL ALMGDKVDNI PGVVKCGPKT AVKWLAEHGT MQEVIANADK VKGKIGENLR
DALEQLPLSY QLATIKCDVE LEQTAGELAA SEPDVDALAE LYQKFELKRL LADLGKGGSD
VGASTSSVAK KTKADSTASV GEQAVEIKAV DVEKTQYDII LDKELFEQWL KKLQACESFA
FDTETTSVHY MKAELVGVSF AIEVGKAAYV PLTHDYEDAP EQLDKEWVLA QLKPLLESKT
IKKIGQNLKY DANVLSHYDI ALQGIEFDTM IESYCYNSVA TRHNMDALAL KYLDYQTVHF
EDVAGKGAKQ LTFNQIDIEK AGHYAAEDAD ITLRLHHAIF PALAETASML SVFNEIEMPL
LPVLARMEQT GVLIDSDILA EQSFTLGQRL DELEIEAHNL AGKSFNLASP KQLQQILFED
LKIPVIKKTP KGAPSTAEEV LQELALDYPL PKVILENRGL SKLKSTYTDK LPLMVSDKTN
RLHTSYHQAV TATGRLSSTD PNLQNIPIRS EQGRKIRQAF IAPKDHKIVA IDYSQIELRI
MAHLSNDKGL VTAFSEGKDI HRATAAEIFA VELGEVTTDQ RRSAKAINFG LIYGMSAFGL
AKQLHIGRQQ AQEYQDKYFQ RYPGVLTYME DTRQQASEQG YVETLYGRRL YLPDINAKNG
MRKKAAERAA INAPMQGTAA DIIKKAMLAV DSWLLEQNDD RIKMTMQVHD ELIFEIHQDI
VEETTAKLVT LMNDAVELSV PLIAEAGIGD NWDEAH
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