Gene CPS_4966 details

Gene Information

• Locus tag: CPS_4966
• Symbol: greB
• ID: 3519972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 5275993
• End bp: 5276475
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637287405
• Product: transcription elongation factor GreB
• Protein accession: YP_271605
• Protein GI: 71279513
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB; [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAT CAAGTTATAT AACTCGCGCA GGCTGGGACC GTTTAGATAA AGAGCTTAAG 
TTTCTTTGGA AAGATGAACG TCCCAAAATT ACTCGCTCAG TCAGTGAAGC AGCGGCACAA 
GGTGATCGCA GTGAAAATGC TGAATATATT TATGGTAAGC GCCGTTTGCG TGAAATAGAT 
CGCCGAGTAC GTTTTTTAAT GAAGCGTACA GAAGATTTAA CCATAGTGTA TCCCGATCCT 
CAGCAAGAGG GCCGAGTATT TTTTGGTGCT TGGGTCACTT TAATCAACGA AGATGATATT 
GAAGTTGTTT ATCGTTTAGT CGGTCCTGAT GAATGGGACG TAAAACGAGG AGAAATTAGT 
ATCGACTCCC CTATGGCTCG TGCGTTGTTA GGTAAAGCCG TTGACGATGA GATAGTTGTA 
AATGCACCTG AAGGTGAGCG TGTTTTTGAT ATTGTCAATA TTAGCTACAA GCTAACGAAA 
TAA 

 

Protein sequence

MKRSSYITRA GWDRLDKELK FLWKDERPKI TRSVSEAAAQ GDRSENAEYI YGKRRLREID 
RRVRFLMKRT EDLTIVYPDP QQEGRVFFGA WVTLINEDDI EVVYRLVGPD EWDVKRGEIS 
IDSPMARALL GKAVDDEIVV NAPEGERVFD IVNISYKLTK