| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4965 |
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| Symbol | |
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| ID | 3522134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5273437 |
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| End bp | 5275827 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287404 |
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| Product | putative transcription accessory protein |
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| Protein accession | YP_271604 |
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| Protein GI | 71281662 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACTA TTGCCGAGCA AATAGCTCAA GAACTCAATG TTAACGCGGT ACAAATTAAT
GCCGCTATTA CCTTACTTGA TGATGGTGCT ACTGTGCCAT TTATTGCCCG TTACCGTAAA
GAAGCTACTC AAGGCTTAGA CGATAACCAT CTTCGTCATT TAGCACAGCG CTTAAGCTAT
TTACGCGAGC TAGAAGACCG TCGACAAGTT ATTTTAGTTA GCATAAAGCA ACAAGATAAG
CTCAGTGCTG AATTAGAAAA ATTAATTAAA CAAGCAGATA ACAAAACTCG ACTAGAAGAT
TTATATTTAC CCTATAAACC AAAGCGTCGT ACTAAAGGTA AAATAGCCAA CGAAGCAGGC
ATAACTCCCT TAGCGAATAA GCTTTTTAAT AACTGGCAAC TATCTCCAAC AACTGAGGCG
GTCGCTTTTA TTAATGAAAC GGCAGGTTTT TCTGATGTGA AAGCTGTGCT AGAAGGTGCG
AGCTATATTT TAGCGGAGCG TTTTAGTGAG GATGCTAACC TACTAGCAAA GCTGCGTAGT
CATTTGTTAA AACAGGCGCA TTTAGCCAGT AAACTTGTTA AAGGCCAAGA AAGAGCAGGC
GCTAAATTTC GTGATTACTT TGAGCATAGT GAAAAGCTGA GAACGGTTCC TTCTCATCGC
ATGTTAGCGA TGTTACGCGG AAGGAATGAA GGTTTTTTAC AACTCAATAT TGATGTCGAT
CCAGGACAAA CTATCACAAC GTTTAATAGT GCAGAACAAC TTATTATTGA GCACTTAACA
CTTAAATGTT TATCATCAGG TAATAAACAA CCCGCTGCGG AATTTTTAAC GAAAGTAGTG
CAATTAACAT GGAAAGCTAA ATTAAACATC AGCTTAACAA ATGAATTGAT CACGAGTTTA
CGCGAGCAGG CAGAAACACA AGCGATAGAC GTATTTTCAA ATAACCTATC CGATGTATTA
ATGGCAGCAC CAGCAGGGCC TCAAGTAACA TTAGGCTTAG ATCCTGGCTT AAGAACAGGT
TGTAAAATTG CCATTGTCGA TGGCACAGGA AAACTATTAC ATACTGCTAC TATATTCCCA
CATGTCCCAC AAAATCATTG GGATAAGTCA CTTCGTACAT TGGTGAATAT TTGCCGACAA
CATAAAGTTG AGTTAGTGGC CATTGGCAAT GGTACCGGCT CGCGAGAAAG TGACAAATTA
GTTGCTGAGG TGATCCAACT CTTTAAAGCG GATGAAAGCA AAGTGCAACT CACTAAGATG
GTCGTTAGTG AGGCTGGTGC TTCTGTTTAT TCCGCTTCTG AATTTGCCGC GAACGAGTTT
CCTGATTTAG ATGTGTCATT ACGTGGTGCT GTCTCTATTG CTCGTCGTTT ACAAGACCCC
TTGGCTGAGT TAGTAAAAAT TGATCCTAAA GCGATAGGTG TTGGCCAGTA TCAACATGAT
GTCAGCCAAA GTCAGCTCAG TAAAACCCTT GATGATGTCG TTGAAGATTG TGTAAATGCG
GTTGGTGTTG ACTTAAACAG TGCTTCAGCG GCGTTATTAA CGCGCGTTTC GGGATTAAAC
AAAACAATGG CTGGTAATAT TGTTGCTTTT CGCGATAGCC AAGGTCGTTT TACCAATAGA
AAACAGTTGA AAAAGGTAGC ACGTTTAGGA CCAAAAGCTT TTGAGCAAGC CGCTGGTTTC
TTACGTATTA CTAACGGTGA TAATCCGTTA GATCAGTCAG CACTTCATCC TGAAAGTTAT
CCAGTGGTTG AGAAAATCCT CAGTCAATTA CAACTTGATG TAAGTAAAGT ACTTAATAAT
AACGAGCAAT TACAATCTCT CGATATCACT CAGTTTACCG ATAATGATAT AGGTGAAATA
ACCATTAAAG ACATCATTAA AGAGTTAGCT AAACCAAGTA GAGACCCTAG ACCGGCATTT
AAAACCGCTA GTTTTGCAGA AGGGGTAAAT ACCATGGCAG ATTTAACCCC AGGTATGATA
CTTGAAGGGG TGGTCTCTAA CGTAGCTAAT TTTGGCGCCT TTGTTGATAT TGGGGTACAT
CAAGATGGAT TAGTACACAT TTCATCAATT ACAGAAAAGT TCATCAGTGA TCCGCGTGAA
ATTGTGAAAG CTGGTGAGGT TGTTAAAGTG AAAGTGGTTG AAGTAGATAT AGCTCGAAAA
CGAATTAGCT TAACTATGCG TTTGGAAGAG CAGGTTAGCG CACAAACTAG CAAACCTGCT
TCAGCTAAAA GTGACGGGAA ACACGATAGC AATAAAGCAA AGAATCACGA AAACAGTAGT
AATAATAAAG GTAAACCAGC CGTAAAGCAC AACAAATCAA AAAGTAAGAA AGTAGACAAT
GCCGCTATGG GTAACGCTTT CGCCGATGCT TTTGCTAAGC TGAAGAAATA A
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| Protein sequence | MLTIAEQIAQ ELNVNAVQIN AAITLLDDGA TVPFIARYRK EATQGLDDNH LRHLAQRLSY
LRELEDRRQV ILVSIKQQDK LSAELEKLIK QADNKTRLED LYLPYKPKRR TKGKIANEAG
ITPLANKLFN NWQLSPTTEA VAFINETAGF SDVKAVLEGA SYILAERFSE DANLLAKLRS
HLLKQAHLAS KLVKGQERAG AKFRDYFEHS EKLRTVPSHR MLAMLRGRNE GFLQLNIDVD
PGQTITTFNS AEQLIIEHLT LKCLSSGNKQ PAAEFLTKVV QLTWKAKLNI SLTNELITSL
REQAETQAID VFSNNLSDVL MAAPAGPQVT LGLDPGLRTG CKIAIVDGTG KLLHTATIFP
HVPQNHWDKS LRTLVNICRQ HKVELVAIGN GTGSRESDKL VAEVIQLFKA DESKVQLTKM
VVSEAGASVY SASEFAANEF PDLDVSLRGA VSIARRLQDP LAELVKIDPK AIGVGQYQHD
VSQSQLSKTL DDVVEDCVNA VGVDLNSASA ALLTRVSGLN KTMAGNIVAF RDSQGRFTNR
KQLKKVARLG PKAFEQAAGF LRITNGDNPL DQSALHPESY PVVEKILSQL QLDVSKVLNN
NEQLQSLDIT QFTDNDIGEI TIKDIIKELA KPSRDPRPAF KTASFAEGVN TMADLTPGMI
LEGVVSNVAN FGAFVDIGVH QDGLVHISSI TEKFISDPRE IVKAGEVVKV KVVEVDIARK
RISLTMRLEE QVSAQTSKPA SAKSDGKHDS NKAKNHENSS NNKGKPAVKH NKSKSKKVDN
AAMGNAFADA FAKLKK
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