| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4954 |
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| Symbol | |
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| ID | 3520231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5256834 |
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| End bp | 5258708 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287393 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_271593 |
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| Protein GI | 71279770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTG AACTTTCAGA AATTAGCACA TTTATTCACA GCATTCCGCC CTTTGATAGT
TTACCTAAAC AAGTGCTTGC TCAGCTTGTT CGTGAATTAA CCATCAATTA CGTTAGAAAA
GGTGATGATT TCCCCCCCAA AGGCATTAAT GAACCAAGGT TATACATATT ACGAAAAGGG
GCTATTAGCT GCCTTTCTGC AGATGGAGAA TTAGTTAGCC GTTTAGGTGA AGGAGACTTG
TGTGACGCTT TTTATCACAG TGATGCCGAC GTACTCAGCA ATAATCAAAC CACAGTAGAA
AGCCAGCTTA ACGTGCATAC TGATGAAGAT TGCTTAATCT ACAGTGTCGA AGCAAGTATA
TTGCATGAAA TAGGTGAGCA TTTTCCCTGT GTTAGTGATT ATTTTAGCCA AAATTCAGCT
CAGCGCTTAA AAACTAAAAT GAGTCAGGTC AATGAAGAGG CCATTTTATC TTCTACCTTG
ATGAATACTT CAGTCAGTAA CTTTTATCAA AGTCCTGTCG CCTCAATTAG TGCTGAACAA
ACAATTCAGC AAGCAGCAGT GCAAATGACA GAACAAGGCT ATTCTTGCTT AGTTGTGCTT
GAGAATGATA ATCCTGTCGG CATTGTTACT GATAAAGATA TCCGCCGACG CTGCGTAGCT
GAGGGGTTAT CAACCAGTGA AGTCATTAGC GCAATTATGA CACGCGATAT GTGTACTATT
GACGCAAAAT GCAACGCATA TGATGCTTTA ATGATGATGA CAGCTAAACA TATCCACCAC
CTTCCGGTCA CAAAATATGA CAACCTTGTC GGTATGGTTA CCGTCACAGA TCTAATTAAT
AACGAAGGCC ATAATGCCAT AAATTTATCT GGCATTATTA ACAAAGCGAA TACGGTAGCC
GAGTTAAAAG AAATCAGCCA CTTGTTACCT AAACTGCAAA TAAGATTAGC CAAATTAGGT
AGCAGTGCCG ACCATGTTGG TAAAAGTGTT AGCGCAATCA CCATGGCTTT CACCAAACGT
TTGATTGAAA TGGCTGAATA CAAATATGGT CAAGCCCCAG TGCCTTATGC ATGGCTTGCT
GCAGGCTCTC AAGCACGACA AGAACAACTG GCTCATTCAG ATCAAGATAA TGCCATTATC
ATCTGTGATT CAATGAATCG TTATGATGAT GCTTGGTTTG AGAGCCTCGC TACTTTTGTC
TGTGATGGCT TAGCCGAGTG TGGTTTTATC TACTGTCCTG GCGATATTAT GGCAACCAAC
CCCAAATGGC GACAGCCCCA AAAAGTCTGG CATAAGTACT TTTCTGACTG GGTAGAAACC
CCTAGTCCGA AGGCCTTATT AAATAGTAGC GTTTTCTTTG ATTTAGAAAC CATTTATGGG
GACGCCTCTT TACTTAACAA AGTAAGAAAG CAGCTCTTGA TAAAAACGCA AAAGAGTACC
TTGTTTATTG CCCACTTATC AAAAAATGCC TTAAATTTAC GTCCACCTCT TGGTTTTTTC
CGTGATTTTG TTTTAAAACA AAATGGTAAA CATAGAGCAA CACTGGATTT AAAACATAAT
GGTATCGCGC CTGTGGTCGA TTTAGCACGA ATTTATGCTC TTGCAGAAGG CATCAGCGCG
GTAAATACCA TAGAGCGAAT TCAACAAGCG GCTGGCACCC CTTCAATAAC GAAAGCGTCC
GCAGAAAACT TGATTGATGC TTACGAGTTT TTAGGTATGC TCAGAGTTGA ACACCAAGCT
AAAGAGTTAG CGCGAGGCGA AAGCGCTGAT AACTTTTTAT CACCAAAAGA AATTTCTAAG
CTAGAGCGTG AACACCTTAA AGATGCATTC AAGGTAATTA AAAGCCTGCA AGACGCTAGA
CAATCGAGTT ACTAA
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| Protein sequence | MDTELSEIST FIHSIPPFDS LPKQVLAQLV RELTINYVRK GDDFPPKGIN EPRLYILRKG
AISCLSADGE LVSRLGEGDL CDAFYHSDAD VLSNNQTTVE SQLNVHTDED CLIYSVEASI
LHEIGEHFPC VSDYFSQNSA QRLKTKMSQV NEEAILSSTL MNTSVSNFYQ SPVASISAEQ
TIQQAAVQMT EQGYSCLVVL ENDNPVGIVT DKDIRRRCVA EGLSTSEVIS AIMTRDMCTI
DAKCNAYDAL MMMTAKHIHH LPVTKYDNLV GMVTVTDLIN NEGHNAINLS GIINKANTVA
ELKEISHLLP KLQIRLAKLG SSADHVGKSV SAITMAFTKR LIEMAEYKYG QAPVPYAWLA
AGSQARQEQL AHSDQDNAII ICDSMNRYDD AWFESLATFV CDGLAECGFI YCPGDIMATN
PKWRQPQKVW HKYFSDWVET PSPKALLNSS VFFDLETIYG DASLLNKVRK QLLIKTQKST
LFIAHLSKNA LNLRPPLGFF RDFVLKQNGK HRATLDLKHN GIAPVVDLAR IYALAEGISA
VNTIERIQQA AGTPSITKAS AENLIDAYEF LGMLRVEHQA KELARGESAD NFLSPKEISK
LEREHLKDAF KVIKSLQDAR QSSY
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