Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4943 |
Symbol | |
ID | 3521217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5238315 |
End bp | 5239079 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637287382 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_271582 |
Protein GI | 71280748 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAC GAAATACTCA ACAACGTCGT CATAATATAA TTGCTGATTT AAATGCTCAG GGTGAAGTGA GTGTTGACAG TTTAGCCAAG CAATTTGATA CGTCAGAAGT TACTATCAGA AAAGATCTCG CCGCTCTTGA AACCAGTGGT TTATTACTAA GGCGCTATGG TGGCGCGGTT GCTTTGCCAA GTGAAATCAC TGAAGCAAAG GTAGACCAAC TGTCTCAACA AAAGTTACAT ATAGCCAAAA AAGCGGCCAT GCTCATTCGT GATCACAATC GTATTATTAT CGATAGCGGT CAAACTACGT CTGCTTTAGT AAGCGAATTA GCGAATAAGA AAGGTTTAGT GGTCATGACT AATGCGCTTA GCATTGCTAA CGAAATTCAT GCCTTAGAAA ATGAACCAAC ATTATTGATG ACCGGTGGAA CTTGGGATGC TACCTCTGAA GCTTTTCAGG GACAAGTTGC AGAACAAGTT TTACGATCGT ACGACTTTGA CCAGCTCTTT ATCGGTGCTG ATGGTATCGA TATTAAGCGC GGAACGACGA CTTTTAATGA ATTAATCGGC CTGAGCCGAG TAATGGCTGA AGTGGCTCGT GAAGTTATAG TGATGGTTGA ATCGGCAAAA ATAACGAAGA AAATCCCTAA TTTAGAACTC AATTGGCAGC AAATTCATAC AGTGATCACA GATGATGGTC TCTCAGAAGA AATGCGAATA GCCTTAACTG AGCAAGGCGT AAAATTAATT ATCGCCAAAG GTTAA
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Protein sequence | MSKRNTQQRR HNIIADLNAQ GEVSVDSLAK QFDTSEVTIR KDLAALETSG LLLRRYGGAV ALPSEITEAK VDQLSQQKLH IAKKAAMLIR DHNRIIIDSG QTTSALVSEL ANKKGLVVMT NALSIANEIH ALENEPTLLM TGGTWDATSE AFQGQVAEQV LRSYDFDQLF IGADGIDIKR GTTTFNELIG LSRVMAEVAR EVIVMVESAK ITKKIPNLEL NWQQIHTVIT DDGLSEEMRI ALTEQGVKLI IAKG
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