| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4936 |
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| Symbol | |
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| ID | 3518417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5230400 |
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| End bp | 5231299 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637287375 |
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| Product | LysR family substrate binding transcriptional regulator |
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| Protein accession | YP_271575 |
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| Protein GI | 71277813 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.249085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ACGTGAGTCT TTCTGATATT AGAACCTTTG TAGTGCTGGC TGAGCAAGGA
AGCTTTACTA AAGCGGCTGA AGCACTAGCG TGTTCAAGAT CACATATTTC TAAACAATTA
GCTCAATTAG AATCTAGCCT CGGTGTTAGT CTGTTGATAA GAACTACCCG CACGCAACAT
TTAACGCCGC AGGGCGAAGC GTTTTATGAA CGCTGTAAAC AGTCACTCAA TGGTATATCT
CATGCTATTG ATCGAGTACT CGAAAGTGCT GACTCTTTAT CGGGTCATAT TCGCATTAAT
TGTGTTGGTG GTTATATTGC AGAGGAGATT ATTGCTACGT TGATAAGTGA TTTTATGGTT
CTCCACCCCG ACATTAATAT TGAACTAGAC TTCTCTAGCC GACGAGTAGA TCTGGTTTCA
GGGGAATTTG ATTTTGTTTT TCGTATGGGG GAATTAGCCG ATTCATCACT TATTGCTAGA
AAACTTACCG ATATAAAGAT AAATACCTAT GTGAGCCCTA AGTACTTAGC AAAAAATGGT
AAACCGAATG ACCCAAAAGG TATGGTACAT CATCGATGTA TTGCAGGCAG TTTAAAAAAC
TGGACGTTCA TTAATAGCGA CAACAATAAA AAAATTGAAG TGATAGTAGC GGGTAATCTT
ACTTGTAAAA ATGGCAGAGT GATGGTCTCT TCAGCTATTG CAGGCAACGG AATCATTAGA
GTGCCAGAGT TATATTGTAA AACAGAACTT GAACAAGGTT TATTGGTACC ACTATTTGAT
CATTGGCAGG TAGAGCCCAC TCCATTTTAT TTAGTTTACG TACAAGATAA ACATCAGCCA
CTGCGTTTAA AAGCGTTTAA GGATTATGTG GTCGAGAATT TTTCGAAGTA TTTAACGTAA
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| Protein sequence | MKKHVSLSDI RTFVVLAEQG SFTKAAEALA CSRSHISKQL AQLESSLGVS LLIRTTRTQH
LTPQGEAFYE RCKQSLNGIS HAIDRVLESA DSLSGHIRIN CVGGYIAEEI IATLISDFMV
LHPDINIELD FSSRRVDLVS GEFDFVFRMG ELADSSLIAR KLTDIKINTY VSPKYLAKNG
KPNDPKGMVH HRCIAGSLKN WTFINSDNNK KIEVIVAGNL TCKNGRVMVS SAIAGNGIIR
VPELYCKTEL EQGLLVPLFD HWQVEPTPFY LVYVQDKHQP LRLKAFKDYV VENFSKYLT
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