| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4935 |
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| Symbol | |
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| ID | 3518918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5229197 |
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| End bp | 5230252 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637287374 |
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| Product | amino acid ABC transporter, ATP-binding protein |
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| Protein accession | YP_271574 |
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| Protein GI | 71278467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTA ATATAAAAAT ATCTATCAAG AAGCTCTATA AAATATTTGG CCCTGACCCT
GAAATGGCGC TGCAACATGT TAAAAATGGC GTTGAAAAAC CCGAACTTTT GGAACAGCAC
GATCATGTAT TGGGTTTGAA AGATATCAAC ATCGATATTT TAGATGGCCA GGTCACTGTG
ATTATGGGAT TGTCTGGCTC TGGAAAATCT ACTTTGATTC GCCATTTTAA CCGGCTGATA
GAACCCACTG ATGGTCAGAT CTTGATTGAT GGTATTAATG TGATGGACCT ATCTAATGAA
GAGCTGCGTA AAATGCGACA GTCAGATATG TCGATGGTGT TTCAAAACTT TGCCCTTCTG
CCTCATAAAA CAGTATTGGA AAATGCAGGT ACGGCTCTGC GAGTCAGAGG GGTTTCAACA
GAAGAGGCGG ATCTAGAAGC TAAAAAATGG CTCGACCGAG TAGGTTTGAC TGGCTTTGAA
GGACACTATC CACATCAGTT GTCCGGTGGT ATGCAGCAAC GAGTGGGTAT CGCCCGAGCG
CTGACCTCAA ACTCGGCAGT GATGTTAATG GATGAAGCTT TTTCAGCACT GGACCCATTG
ATCCGTAATG ATATGCAAGA TCTACTGCTA GCACTTCAAA AAGAGCTGCA CAAGACGATT
ATCTTTATTA GCCATGATCT AGATGAAGCG CTTAAACTAG CTGACCATCT GGTTATCCTC
AAAGATGGTG AAGTAATTCA ACAAGGTGAA CCCCAGCATA TTCTATTAAA CCCTTGCGAC
CCTTACATTG AAAGTTTTGT CAGCGAAATT AACCGGGTAC GAGTACTGCG AGTACGTTCA
GTGATGCAAC CGCTACCTGA TAACTCCTTA GATACAGCTG GCAGTGTCGA TGTCAACGCT
ACGCTAGAAG ATGTGATCTC TCATTCAGGT GGCGACACTA ACAAGGTGTA CTTAGTCAAG
AAAGAAGGCG AAGCTGTAGG GACTATATGC ATGAAAGACT TAGTGCGTGC TCTGGTGCCC
AGAGTTCCCT CCCAAAAAGA AACTATAACG GCTTAG
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| Protein sequence | MTANIKISIK KLYKIFGPDP EMALQHVKNG VEKPELLEQH DHVLGLKDIN IDILDGQVTV
IMGLSGSGKS TLIRHFNRLI EPTDGQILID GINVMDLSNE ELRKMRQSDM SMVFQNFALL
PHKTVLENAG TALRVRGVST EEADLEAKKW LDRVGLTGFE GHYPHQLSGG MQQRVGIARA
LTSNSAVMLM DEAFSALDPL IRNDMQDLLL ALQKELHKTI IFISHDLDEA LKLADHLVIL
KDGEVIQQGE PQHILLNPCD PYIESFVSEI NRVRVLRVRS VMQPLPDNSL DTAGSVDVNA
TLEDVISHSG GDTNKVYLVK KEGEAVGTIC MKDLVRALVP RVPSQKETIT A
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