| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4934 |
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| Symbol | |
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| ID | 3523279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5228145 |
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| End bp | 5229185 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637287373 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_271573 |
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| Protein GI | 71278998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTT ATGACTCGCT ATTCGATTCA CTTGGGTTAC AGGACTGGTG CAGTAACGAA
GCTAAAGGCG GGCCAATGAC AATGGCTGAA CTTTTAGCAA AAAGCAAAGG CTCTGCGGTA
ACCGAAGACA CTTCTCTGTG GAATGTACCT TTCCCATCAC TCGATAACCT CCATGGCGCT
TGCAACAGCA TCCCTCGTAC GCGAGATATG ACTTCAGGTG TCGAGCAACT TTTTCTCAAT
GTGAAAAGCA GCCTTCAGTT TGTACTTGAT CCCCTAACAC AGCCTCTGAG CTGGCTATTG
GATGGCTCTA TCTGGTTATT CGTTGCTACG CCTTGGTGGC TTTTGATCGG ATTAACACTT
ATCGCTGTGC AAATGATGAC TCGTTCAAAA GGCGCTACCT TGCTGACCGC TATTACTTGG
TTTTTCCTCG CTTTTATCGA CCACTACTCT TACGCTGTGC AAACTATGGC AATTATCTTT
GTCTGTACGG GGATCAGTGT TTTACTCGGC GTTCCCATCG GCATAGCGAT GTCAAAATAC
GATAGGTTTC AAAAAGGTGT CATTCCGATT CTTGATATGC TGCAAACTTT GCCCTCCTTT
GTCTATCTCA TTCCACTCAT CTTTCTGTTT AGTGTCACCG AATCCAAATT ATATGGCATT
GCGATTATTA TGTACGCGAT AGTTCCAGTA ATTAGGCTCA CTGATTTGGG TATACGATTA
GTCGATAAAG ATATTATTGA AGGGGCTAAT GCCTTTGGTA TGAGCGCCCG TCAGAAATTG
TTCAATGTTG AACTGCCACT GGCACTACCT AACATTATGG CCGGCGTTAA TCAGACTATT
ATGATGTCAC TGGCGATGGT GGTTATTGCT TCACTAGTCT CTGCTCCGGG TCTTGGTGTA
TTGGTATTGC GGGGAATTAA TAACCTTGAG CTCGGTGTGG GACTAGTCTC TGGTTTCTGT
ATCGTAATTT TGGCCATCTT GCTCGATCGT GTAAGTAAAG CAACGCTAGC ACGGATTGAT
GTCTCTCAAT CTAACACCTA A
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| Protein sequence | MSFYDSLFDS LGLQDWCSNE AKGGPMTMAE LLAKSKGSAV TEDTSLWNVP FPSLDNLHGA
CNSIPRTRDM TSGVEQLFLN VKSSLQFVLD PLTQPLSWLL DGSIWLFVAT PWWLLIGLTL
IAVQMMTRSK GATLLTAITW FFLAFIDHYS YAVQTMAIIF VCTGISVLLG VPIGIAMSKY
DRFQKGVIPI LDMLQTLPSF VYLIPLIFLF SVTESKLYGI AIIMYAIVPV IRLTDLGIRL
VDKDIIEGAN AFGMSARQKL FNVELPLALP NIMAGVNQTI MMSLAMVVIA SLVSAPGLGV
LVLRGINNLE LGVGLVSGFC IVILAILLDR VSKATLARID VSQSNT
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