| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4929 |
|---|
| Symbol | |
|---|
| ID | 3522694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 5221722 |
|---|
| End bp | 5222966 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637287368 |
|---|
| Product | oxidoreductase, molybdopterin-binding |
|---|
| Protein accession | YP_271568 |
|---|
| Protein GI | 71282221 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA ATAAAACCCA TCTTGTACAA CAATCTCGTC GTCAATTTTT ACGCAAAGCA
AGCATGTTAG CTCTAGGAGC GTCTCCATTA CTTAGCTTAG CGGCAACCGA CAATAATGAA
GGCGTTAGCC TTGCCGGAGG CATGAGACCT TTAGTTAAAT ACCCGGGAAA ACGGGATTTG
ATCTTGGTTC ACAGCAGGCC GCCCCATTTA GAAACACCTT TTTCTGTCTT TAATGAAAGC
CTTATTACCC CAAATGACGC ATTTTACGTT CGTTATCATC TTGCAAACTT TCCTACCGAA
ATAGACTTAA AAAAATATAA ACTTAACATT AACGGCGCGG TTAACAAAAC ACTCCAGCTT
AGCCTTCAAG AACTCAAGTC AATGGCAGAG CCTGTTGATG TTGTTGCAGT TAACCAATGT
TCAGGAAACA GCCGAGGTTA TTCATCACCA CGTGTTTTTG GTGCTCAACT AAGTAATGGT
GCCATGGGAA ATGCACGCTG GACCGGTATC CCTCTTAGAA CAGTGTTGGA AAAAGCAGGT
GTATCACCTG AAGCAATGTA CGTTACTTTT AATGGTCTTG ATAAGCCCGT ATTACCCACC
ACTCCTGACT TTATAAAAGC ACTAAATATT GAACATGCTC TTAGCCCAGA ACCATTACTT
GCATGGGGAA TGAATGGTGA AGACCTGCCA TTTTTAAACG GTTACCCTTT GAAGCTAATT
GTTCCAGGCT ATTTCGGTAC GTATTGGGTT AAACATTTAT CTGAAATCAC GGTATTAGAT
ACTGAATTCA CCGGTCAAGA TTCCTATTTC ATGAATACCG CTTATCAACT GCCCGACAAC
GACTGTCTAT GTGTTACGCC AGGCAGTACT GCTGAGAAAA ACCGTCCGAT TTCAACACTG
CCAGTTCGGA GTTTTATTAC TAATATTTCT GCTGACGATA CCCTCTCTTC AGCTAAGCCA
ATTGAACTTG AAGGCATTGC CTTTGACGAT GGCTCTGGCA TAAAAAATGT CGATATATCA
ATCGATGGCG GTTTAACTTG GCTAACCAGT ACCTTAGGTG AAAGCCTGGG ACGTTTCTCC
TTTCTTCCTT GGAAACTTAC CGTAAGTTTT GCACAAAAAG GAAAGGCAAC TGTCATGGTA
CGAGCCAGTA ACAACAATGG TGAAGTGCAA CCACTTAGAG CAAGCTGGAA TCATGGTGGC
TATAGACGTC ATGCCATTGA ATCAGTCGCC ATTAACGTTA TATAG
|
|---|
| Protein sequence | MADNKTHLVQ QSRRQFLRKA SMLALGASPL LSLAATDNNE GVSLAGGMRP LVKYPGKRDL
ILVHSRPPHL ETPFSVFNES LITPNDAFYV RYHLANFPTE IDLKKYKLNI NGAVNKTLQL
SLQELKSMAE PVDVVAVNQC SGNSRGYSSP RVFGAQLSNG AMGNARWTGI PLRTVLEKAG
VSPEAMYVTF NGLDKPVLPT TPDFIKALNI EHALSPEPLL AWGMNGEDLP FLNGYPLKLI
VPGYFGTYWV KHLSEITVLD TEFTGQDSYF MNTAYQLPDN DCLCVTPGST AEKNRPISTL
PVRSFITNIS ADDTLSSAKP IELEGIAFDD GSGIKNVDIS IDGGLTWLTS TLGESLGRFS
FLPWKLTVSF AQKGKATVMV RASNNNGEVQ PLRASWNHGG YRRHAIESVA INVI
|
|---|
| |