| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4925 |
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| Symbol | |
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| ID | 3519749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5214787 |
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| End bp | 5216631 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637287364 |
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| Product | sensory box sensor histidine kinase |
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| Protein accession | YP_271564 |
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| Protein GI | 71279295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATTG AAGCAGAACA GAATATCTAC GAGAAATTCT TTAACCTATC TATTGATATG
TTATGTGTAG CTAATACAGA GGGCCATTTC CAAACCATTA GCCCCTCATT CACCCAAGTA
CTAGGCTATA GCGAAGAAGA GTTACTCTCC GCGCCCATCC TTGATTTCAT ACACCCAGAT
GATGTCGATA AAACAGCTCA AGAATTTGCC AAATTAAACT CAGGACAAGA TTCTTTATTT
TTTGAAAATA GATACAGGCA TAAAAACAAT CACTATTTAA CATTTTCATG GAATGGTTAT
TTTGAGGGTG ATTCAGGACT TATCTATGCC GTTGCTCGTG ATATTACCGA GCAAGTTAAA
GTTCGAAATA AACTGCAACA CTTGCAACGC GCATTAGCGC AAGAAACTAT TTATGCTGAA
ACCGATATAA GTGGTGTTAT CACCAAAGTT AATGATAATT TTTGTCAAAT ATCGGGATAT
TCAAAAGAAG AATTAATAGG TAATACACAC AAATTAATCA ATTCGGACCA TCACCCAGCC
TCTTTCTTTA GTGAGATATG GAAAAAAATA TCATCAGGAA AGATTTGGTC AGGCGCTATA
AAAAATCGCA AGAAAAATGG TGAGTACTAC TTTGTACAAA GCATTTTAGT ACCTATATTC
GATAATAATG AGAAAATCTC TAATTTCATT GCCATAAGGC AAGATATAAC CGACAAAGTT
AATAGTGAAC ATGATCGCTT AAAGGCCCTT GAGATCCTCA GTGAAACAAG TTCAGCAGCA
AAAATTGGCG GTTGGGAAAT GGATGTTGCT ACCGGCTTGC TAACGTGGAC CAATGAAACC
TTTAGAATAT TAGACGTTGA ACAAGTTGAC GGATTATCGC CGATGTTACC CGAAGGATTG
CAGCTATTTA TTGCTGAAGA CCAGCCCATT ATTGAGAATG CTGTTGGCAG GGCGATAGAA
TTTGGCGAAT CTTATGGTTT AGAGCTACAA GCCAGAACAC CAAAAGGTAA TATAAAATGG
ATATATACCA ATGGTAAAGC TAACTATAAA GATGGAAAAA TCGAAACAAT ATCGGGCACT
ATTCAAGACA TTCATCAACG TAAAATTACC GAGATAAAGT ATAATCAAGA AAGACAAAAA
AGCATTATGA ACGCAAAGTT TGCAGCACTT GGCGAGCTAT CAGCAAGTGT TGCCCATGAG
ATAAATAATC CACTAGGTGT AATTTCTGGT TACGCTGAAT TATTACAACT AACTAATACC
ACGGCATCCC CAGAAGATAT TTTAGCAAAA TCCGCTATTA TTCTAAGGTC TTGTGATCGA
ATTACTCATA TCGTTAAGAG TCTGAAAAAA TTCTCCCGAA GCGATGAAGC AATCCAACAT
ACTAGTTGCT CGCTTAAAAA TCTGATTAGT GAAGCGATAG TGCTCACTAG ACCCAAACTA
AAACTTTGTA TGATAGAGCT GCAATGTGAG TATATCGAAG ATAGTAATAT TCTGTGTAAC
GAAATAGAAA TTGAACAAGT TATTGTAAAC TTAATTAATA ATGCTATCGA TGCTTTATCA
GAACTTCCTG ACAAATGGAT TGATATCTTA GTCACCGAAA CGACACAAGA TTACATCATT
TCAATTACCG ATGCTGGCAT CAGCATTCCA ATAGATAAAC AGTTATCAAT ATTCGAACCA
TTTTTTACTA CAAAAAATAC CGGGGAAGGT ACTGGGCTTG GTTTATCTAT CGTAAAGGGG
ATTTTAGATA ATCATGGCGC CAAAATTTCG ATCGATAATA ACAACAAAAA TACATCTTTT
GTTATTCATT TCCCTAAATT GAATAACAAA GTGAGTAAGG GGTAA
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| Protein sequence | MPIEAEQNIY EKFFNLSIDM LCVANTEGHF QTISPSFTQV LGYSEEELLS APILDFIHPD
DVDKTAQEFA KLNSGQDSLF FENRYRHKNN HYLTFSWNGY FEGDSGLIYA VARDITEQVK
VRNKLQHLQR ALAQETIYAE TDISGVITKV NDNFCQISGY SKEELIGNTH KLINSDHHPA
SFFSEIWKKI SSGKIWSGAI KNRKKNGEYY FVQSILVPIF DNNEKISNFI AIRQDITDKV
NSEHDRLKAL EILSETSSAA KIGGWEMDVA TGLLTWTNET FRILDVEQVD GLSPMLPEGL
QLFIAEDQPI IENAVGRAIE FGESYGLELQ ARTPKGNIKW IYTNGKANYK DGKIETISGT
IQDIHQRKIT EIKYNQERQK SIMNAKFAAL GELSASVAHE INNPLGVISG YAELLQLTNT
TASPEDILAK SAIILRSCDR ITHIVKSLKK FSRSDEAIQH TSCSLKNLIS EAIVLTRPKL
KLCMIELQCE YIEDSNILCN EIEIEQVIVN LINNAIDALS ELPDKWIDIL VTETTQDYII
SITDAGISIP IDKQLSIFEP FFTTKNTGEG TGLGLSIVKG ILDNHGAKIS IDNNNKNTSF
VIHFPKLNNK VSKG
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