Gene CPS_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4923 
Symbol 
ID3520900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp5213562 
End bp5214245 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID637287362 
Product2OG-Fe(II) oxygenase family oxidoreductase 
Protein accessionYP_271562 
Protein GI71280434 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGTTGA GCCTAGCTCA AACAACATAT TCTGGCGGTG ACACATCACT GTTCGAATCA 
ATATCCGGTG ACATCGTCGA CAAGGGATAC AGTATTCGTC CTTACGCTTT GCCTACAAAC 
TTAACCAGCT TGTTATCACA ACATATCATC GAACTGCCCA CTGACGAATT TAAACGTGCA 
GGTATAGGTC GAACTAAAGA TCATATGATT AACGACTTTA TTCGCACAGA CGCAATAAGT 
TGGATAACCG ATGATAGCGA GGCAGGTTGT GCTTGGATAA ACTGGGCGGA GTCACTACAA 
GCCTATTTAA ATAGACGTTT ATTCTTGGGT CTATTTTCTT TTGAAAGTCA TTTTGCCCAT 
TATGCGAAAG GCGATTTTTA TAAGAAACAC AAAGACGCGT TTAAAGGTGA AGGTAATCGT 
GTGTTATCTG TTGTGGTCTA TCTTAATCCC CATTGGGCTT CATCGGACGG TGGTGAGTTA 
GTCATTTATG ATAAAAACAG CCCTTCCTCA GTAGTGGTTG ATAACAGTAA AATTACCGTC 
ATACCTAGTT TTGGTACCAT AGTGGTATTT TTAAGTGAAG AATTTCCTCA TGAAGTATTA 
GCCGCAAAAC GTGACCGATA CTCTATAGCG GGCTGGTTTC GCTTAAACAA TAGTATTGCC 
AATAATATTG ATCCGCCAAG TTAA
 
Protein sequence
MSLSLAQTTY SGGDTSLFES ISGDIVDKGY SIRPYALPTN LTSLLSQHII ELPTDEFKRA 
GIGRTKDHMI NDFIRTDAIS WITDDSEAGC AWINWAESLQ AYLNRRLFLG LFSFESHFAH 
YAKGDFYKKH KDAFKGEGNR VLSVVVYLNP HWASSDGGEL VIYDKNSPSS VVVDNSKITV 
IPSFGTIVVF LSEEFPHEVL AAKRDRYSIA GWFRLNNSIA NNIDPPS