Gene CPS_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4916 
Symbol 
ID3522588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp5206279 
End bp5207319 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content40% 
IMG OID637287355 
Productputative C4-dicarboxylate-binding periplasmic protein DctP 
Protein accessionYP_271555 
Protein GI71282115 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TACTAGCAGC TTTATTAACA CTAAGTCTTA GCTTAGGTGT GAGTGCTGAA 
ACTTGGAAGT TCGCCTCTGA AGAAGATAAA CAAGATGTAC AAGACATTTT CGCGAAAACG
TTCGCGAAAA CCATCAAAAA AGAATCCGAC GGTGATATTC GAGTAAAAGT TTATTATTAC
GGTCAATTAG GTACAGAGAA CGACATTGTT GAGCTGACAG CTAAAGGAAC CATTCAGTTT
GTCTCAGTAG GGACTGGTCA TTTAGGCTCT TATGTACCTG AAGTTCAAGC ACTGAGTATA
CCGTATGTTT TAGGCACTGA TACTGATGTT GTGCGTAAAG TACTGACCAC CAGTAAAACT
ATCTATGGTG ACTTGGCTAA TCGTTTCGAA AAAGTAAATT TGAAGTTATT GACCATGATG
TCCGAAGGTG AAATGGTTTG GGGTGCCAAC AAAGCGATCC GCAGTCCTGA AGATTTTGCA
GGCCATAAAA TCCGTACATT TACTTCGACT ATTCCGGTAG AAACCTACAA AGCATTTGGT
GCTACCCCTA CTCCATTGTC TTGGGGTGAA GTATATGGTG CGCTACAACT TAAAACAGTG
GATGGCATGG TTAACCCCAT TTACTTTGTT TACAACGCTA AGTGGCATGA AGTTCAAGAT
TATTTGATGT TTCCTGGCCA ACAGCCATAC GTCAGCACGG TCTCTACCAA TAGCACATGG
TTCAATGGGC TATCGCCTGA GAAAAAAACC ATGGTACGCA AGGCTATCGT TGTTGCCGAA
CAAGCTGCTC ACGAGTATCA AATCCGTATA AACCAAGAAA ATCTGGACAA AATAATCGCT
GAGCGTCCCG ACTTGAAGAT TATTGTTCTC AATGAAGAAG AACGTACGCG CTTCAAAAAG
TTAAGTAAGT CAATTAATAA AACATTCTAT GATGTGGTCG AAAATACTTA TCAAGAGTCA
GAAAAAGCGC AAGCTCGTGT TAGTGCTAAA AAAATCGTGA AAAATTTGAT CAAAGAAGTT
AAGGAAGCGA CAAAACAGTA A
 
Protein sequence
MNKLLAALLT LSLSLGVSAE TWKFASEEDK QDVQDIFAKT FAKTIKKESD GDIRVKVYYY 
GQLGTENDIV ELTAKGTIQF VSVGTGHLGS YVPEVQALSI PYVLGTDTDV VRKVLTTSKT
IYGDLANRFE KVNLKLLTMM SEGEMVWGAN KAIRSPEDFA GHKIRTFTST IPVETYKAFG
ATPTPLSWGE VYGALQLKTV DGMVNPIYFV YNAKWHEVQD YLMFPGQQPY VSTVSTNSTW
FNGLSPEKKT MVRKAIVVAE QAAHEYQIRI NQENLDKIIA ERPDLKIIVL NEEERTRFKK
LSKSINKTFY DVVENTYQES EKAQARVSAK KIVKNLIKEV KEATKQ