Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4882 |
Symbol | |
ID | 3519193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5178070 |
End bp | 5178507 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637287321 |
Product | hypothetical protein |
Protein accession | YP_271521 |
Protein GI | 71278196 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.192272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATATA AACATGTAAA AGCAGGTGAA TCAGAACGAT ACAATCTAGC AGGAGGAGAA CTTACCTCAA TTCTTGCAAC AGGTTTAGAT ACAGACAATC AAGTGTCTAT TTTTGACAGT AAACTTCCAA AAGGAAATGA GGCTCCTTGG CATTATCACG AAATTGATGA TGAAATTTTT TATATTATTT CAGGTGAAGT AGAGTTTGAT GTAGAAAAAG AAAATTTTCT AGCTACAGCT GGTGACTTAA TTATCGCTGG GCCTAACGTG AGTCGACGTT TTAAAGCTAT TTCAGATAGT CACTTACTGG TAATAAATAC ACCTTCAGGT CCATCTGAAA ATTTTATTAG AGATATTTCA ACGTTTTCAG ATGACAATCC TCCTACGGAT AAAGACAAAA AATCATTCAT AGAAAAATAT AAAATCCATA TTATTTAG
|
Protein sequence | MRYKHVKAGE SERYNLAGGE LTSILATGLD TDNQVSIFDS KLPKGNEAPW HYHEIDDEIF YIISGEVEFD VEKENFLATA GDLIIAGPNV SRRFKAISDS HLLVINTPSG PSENFIRDIS TFSDDNPPTD KDKKSFIEKY KIHII
|
| |