| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4870 |
|---|
| Symbol | |
|---|
| ID | 3520768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 5165665 |
|---|
| End bp | 5166006 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637287309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_271509 |
|---|
| Protein GI | 71280303 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2351] Transthyretin-like protein |
|---|
| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA TTACTACCCA TATACTTGAT ACTACCCGTG GATTACCCGC GAAGAATGTA
CCTATCACCT TGTTTGCTCA AGACGGTGAA GGTTGGAAAG AAGTCAATGG TGGTGTCACC
AATGAAGACG GACGTTTACC CGGTTTATTG GCTGTTGACG AAACATTAGC AGCGGGTGTT
TACCGTATGC ATTTTGCTAC CGCGGTTTAT TTTAAAGCCA ACAACGAAGC AGGGTTTTAC
CCATACGTTG ATATCGTTTT TGAAATCGAT GCCAGCGGCA CGCATTACCA CATTCCATTA
TTGCTAACCG CATATGGATA CTCTACTTAT CGCGGTAGCT AA
|
|---|
| Protein sequence | MSQITTHILD TTRGLPAKNV PITLFAQDGE GWKEVNGGVT NEDGRLPGLL AVDETLAAGV
YRMHFATAVY FKANNEAGFY PYVDIVFEID ASGTHYHIPL LLTAYGYSTY RGS
|
|---|
| |