| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4850 |
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| Symbol | |
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| ID | 3521859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5142207 |
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| End bp | 5142872 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637287289 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_271489 |
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| Protein GI | 71281387 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.662783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGAAA TGGATTCTTT AACGACAACA GAAGACTACC AACTCATTAC GCATATTTTA
GCGGGCAATA TTAATGCCTA CGAAGTCGTA ATACGTCGCT ATAACCAGCT TATGTTTCGC
ATAGCCAAAG GTATTTTTGC TGATGACGAT GAGGCGATGG ATATTGTGCA AGAAGCGCAC
ATTACCGCTT ATCAAAAACT CGCTACCTTT AAGGGACCAA AAGGTTTTAT GACTTGGATT
GCCACTATAA CGCGAAATAT TGCTTTGATG CGTTTAAGAA AATCTAGTCG CTTAAGCTAT
AAAGAGGAGG AAGAAGTGTT TAATTTAATT GAACTTGATA CTGCCGCCGA GCCCATTCAT
GACGCTATTG CTAATCAACA AACTAAAGCT ACGCTAGAAC AATTAATTAA CGCATTACCG
ATAAATTATC GTGCGATCTT TATTTTACGT GCCATTGAAA AAATGGCGAT AAATGATATT
GCTCAAATAC TTTCACTTGA ATATAACGTT GTAAAAGTAC GCTTTCATCG AGCTAAAAAA
ATGTTAAAAA TCGAAATAGG GGAGATACTC ACCGAACAGA AGCTTAGTTT GTATGAATTT
GCAGGTGATC GCTGTGACAA CATAACGCGC AATGTAATGG CGGTTATCAA GCAGGAAAGT
CGATAA
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| Protein sequence | MTEMDSLTTT EDYQLITHIL AGNINAYEVV IRRYNQLMFR IAKGIFADDD EAMDIVQEAH
ITAYQKLATF KGPKGFMTWI ATITRNIALM RLRKSSRLSY KEEEEVFNLI ELDTAAEPIH
DAIANQQTKA TLEQLINALP INYRAIFILR AIEKMAINDI AQILSLEYNV VKVRFHRAKK
MLKIEIGEIL TEQKLSLYEF AGDRCDNITR NVMAVIKQES R
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