Gene CPS_4817 details

Gene Information

• Locus tag: CPS_4817
• Symbol: msrA2
• ID: 3518868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 5110416
• End bp: 5110970
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637287256
• Product: peptide methionine sulfoxide reductase MsrA
• Protein accession: YP_271456
• Protein GI: 71278534
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0225] Peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00401] methionine-S-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATC AACGCAACGA TAAAGCGGTA CAAACAGCGA CTTTAGCCGG AGGCTGTTTT 
TGGTGTATTG AAAGTGCGCT TAATATGGTT AAGGGTATTA TTACTGCGAA GCCTGGTTAT 
ATGGGCGGGC AGAGTACAGC GCCAACGTAT GAAGAGGTTT GTACTGGTAG CAGTGGTCAT 
GCTGAAGTAG TACAGCTAGA GTTTGATAGT GAAGTGATTA GCTATAGGGA AATATTAGAG 
ATATTTTTCA GTTTGCACAA TCCAACGCAG TTAAATCGAC AAGGAAATGA CATCGGAACA 
CAATACCGTT CTGAAGTTTT CACCCATGAT GCTCTACAAC AAAAAATTGC TTTAGCTATC 
ATTGAAGAAA TCAATCAAGA GCAGCTATTT GATGATTCTA TTGTCACCGA AGTTAGTCCA 
GCGGTTACCT TTTATTGTGG AGAAGATTAT CATCAAAATT ACTTTAAAAA TAATCCAGAA 
AATCAATATT GCCAAGCCGT GGTATCACCT AAATTAGCTA AGTTTAGGAA AACCTTTGTT 
GCTAAATTGA AATAA 

 

Protein sequence

MTDQRNDKAV QTATLAGGCF WCIESALNMV KGIITAKPGY MGGQSTAPTY EEVCTGSSGH 
AEVVQLEFDS EVISYREILE IFFSLHNPTQ LNRQGNDIGT QYRSEVFTHD ALQQKIALAI 
IEEINQEQLF DDSIVTEVSP AVTFYCGEDY HQNYFKNNPE NQYCQAVVSP KLAKFRKTFV 
AKLK