| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4806 |
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| Symbol | aceF |
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| ID | 3518940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5096546 |
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| End bp | 5098195 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287245 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_271445 |
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| Protein GI | 71278450 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATAG AAAAAGTTCT AGTCCCTGAT GTGGGTGGCG ACGAAGTTGA AATCATTGAA
ATTTGTTTTG CGGTTGGCGA TACCTTAGAA GCAGATGAAG GTATTGTTAC TGTTGAAACT
GATAAAGCTT CAATGGATAT TCCAGCACCG TTTGCGGGTG AGCTTGTTAG CTTAACCGTA
AAAGTTGGCG ACAAAATTAA AGAAGGCGAT ATTATTGCTG AAATGAAGGC GACTGGTGCA
GTATCTGCTC CAGCTGAAGA AGCGCCTGTT GCAGCCGTAG TTGAAACACC TGTAGCACCG
GTTGCTGCTG TTGTTGAAGC GGCTCCAGTA GCTGCCGCTG TTGCTACTGC CTCGCAAGTG
ATTGAAATCG CAGTACCTGA TATTGGCGAA GACGGCGAAG TCGACGTTAT TGAAGTATTA
GTTAGCGTTG GTGATGTGAT TGAAGAAGAA GATGGTTTAA TCACACTTGA AACAGATAAA
GCAACGATGG ATGTTCCATC AACGCATGCC GGTACTGTGA AAGAAGTATT TATTAGCAAC
GGTGACAAAG TTAAGCAAGG TTCTCTGGTT ATAAAACTTG AAACTGCTGG CGGCGTTGCA
CCTGTTGCTG CAGCACCTGC AGTTCAAGCT GCACCAGTAG CGGCTGCTCC TATTGCAGCC
CCTGCAGTTG TAAAATCAGC ACCTGTTCCA CATCATCCAC AAGCGGGTAA TGTCAAGAAA
GGTACTATTT ACACTTCACC TTCAATTCGT CGTCTTGCAC GTGAATTTGG TGTTGATTTA
ACCTTAGTGA AAGGCACTGG TCGTAAAGGC CGAATCTTAA AAGAAGATGT GCAATCATAT
GTTAAATATG AGCTATCTCG TCCAAAAGCG AATGCAGGTA GTTCAGTTGC TGCGGGTGAA
GGTGGTTTAC AAGTAGTGAG TGCTAAAGCG ATTGATTTCT CTAAATTTGG CGAAATTGAA
ACGAAAGCAT TAACGCGTAT TCAGAAAATA TCTGGACCAT TTTTACATCG TAATTGGGTA
ACTATTCCAC ATGTTACTCA ATTCGATGAA GCTGATATCA CTAACGTTGA AGCGTTCCGT
AAAGAACAGA ACGTTGTTTG TGAAAAGCAA AAGCTTGGTT TTAAAATTAC ACCATTAGTT
TTCATCTTGA AAGCAGCGGC AGATGCATTA CGTGCATTCC CAACGTTTAA CTCAAGCTTG
AGTGAAGACG GTGAAAGCTT GATTCTTAAA AAGTACATTC ACATAGGTGT TGCGGTTGAT
ACTCCAAATG GTTTGGTTGT ACCGGTAGTT CGTGATGTTG ATCAAAAAGG TATTCATCAG
TTATCTCGTG AATTACTTGA AATCAGTATG AAAGCACGTG ATGGCAAGCT AAAAGCAACA
GATATGCAAG GTGGTTGTTT TACTATTTCT AGCCTGGGTG GTATTGGCGG TACGGCATTT
ACGCCAATCG TTAATGCACC AGAAGTGGCT ATTTTAGGTG TTTCTAAATC AGAAATAAAA
CCTAAGTGGA ATGGTAAAGA CTTCGAACCT AAATTGATGT TGCCATTATC AATGTCTTAC
GATCATCGCG TTATTGATGG TGCATTAGCT GCACGTTTCA CTGTGCATTT AGCAGGTGTT
ATGTCTGACA TTCGTAAGTT AGTACTTTAA
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| Protein sequence | MSIEKVLVPD VGGDEVEIIE ICFAVGDTLE ADEGIVTVET DKASMDIPAP FAGELVSLTV
KVGDKIKEGD IIAEMKATGA VSAPAEEAPV AAVVETPVAP VAAVVEAAPV AAAVATASQV
IEIAVPDIGE DGEVDVIEVL VSVGDVIEEE DGLITLETDK ATMDVPSTHA GTVKEVFISN
GDKVKQGSLV IKLETAGGVA PVAAAPAVQA APVAAAPIAA PAVVKSAPVP HHPQAGNVKK
GTIYTSPSIR RLAREFGVDL TLVKGTGRKG RILKEDVQSY VKYELSRPKA NAGSSVAAGE
GGLQVVSAKA IDFSKFGEIE TKALTRIQKI SGPFLHRNWV TIPHVTQFDE ADITNVEAFR
KEQNVVCEKQ KLGFKITPLV FILKAAADAL RAFPTFNSSL SEDGESLILK KYIHIGVAVD
TPNGLVVPVV RDVDQKGIHQ LSRELLEISM KARDGKLKAT DMQGGCFTIS SLGGIGGTAF
TPIVNAPEVA ILGVSKSEIK PKWNGKDFEP KLMLPLSMSY DHRVIDGALA ARFTVHLAGV
MSDIRKLVL
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