| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4804 |
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| Symbol | |
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| ID | 3520430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5093745 |
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| End bp | 5094794 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637287243 |
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| Product | TonB domain-containing protein |
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| Protein accession | YP_271443 |
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| Protein GI | 71279967 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA AAATACTCTA CGCGAGTGCC GTTGCTCTTC TAGCTGTTAG CACTAACGGC
CAAGTTTCTG CCAACGAAAT TTCTCAGCAC CTATCAACGA TTATCATTCC TGAGCCTATT
GAACGTATTC AACCTAAATA TCCTATTGAC GCGGCTCGAG AAGGCCGTGA AGGCTGGACA
ATTCTTAGTT TTGTTATTGA TGAAAAAGGC AACGTATCTG ATGCTTTAGT TAAAGAATCT
TCTGGTAGCG AAGATTTTGA TAAGGCAACG CTAAAAGCCG TGACTAAATG GAAGTATCAA
CCGGCATTTG AAAATGGTAA GCCAATACAG CAGTGTGTTA ATACAGTACA AATGGATTAC
CGTATGGGCA AGAACGTTGG AACTAAAGGA GTGTCTCGAA GATTTAAGAA AAAATATGAA
ATAGCTACTC AAGCCTTGAA AGATAAAGAT TACCAGGCAG TAGAGCATCA ATTAGCTAAG
ATGAATGCAC GAAAAACAAT GCACCTGAGT GAGAATAACT ACATGCACAT TCTTGCGGCA
AATTATGCAA GAGAAATAGG TAATGATACA TTACAGTTAT ATCACCTTGA TCGAGTGACC
CTTGATAGCG GAGTAAAAAG TGAGAATTTA AAATTTTCAG TGCTGTATCA ACAATTTTAC
TTAGAGACGA CTTTATCTAA GTTTCAAAGT GCATTTGCTA CCTATAAACA GCTTATTAAG
CTTGAAGAGG CTAAGCCTTA TTTAGCAAAA CTTAAAAAGG TCATGGCAGA TATTGATTCT
GTAATCAGTA GTGATAAGGA TATAGTTATT GATGCTGCTA TTGATAGTGA TTACTGGTAT
GCAGACTTAG TTAGAAATGA GTTTTCATTA ACCAATATTG AAGGGTCCTT GCATACTTTA
GATGTTCGTT GCGCTAATAA ACGTCATGTT TATACGGTAG AAAATAATAA TACTTGGAGA
ATTCCTACAA GTTGGATGAA TTGTAGTATT TATGTCTACG GTGAGCCAAA AACGAGTTTT
AATTTGATTG AGCATCCTGT CGACATATAA
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| Protein sequence | MSHKILYASA VALLAVSTNG QVSANEISQH LSTIIIPEPI ERIQPKYPID AAREGREGWT
ILSFVIDEKG NVSDALVKES SGSEDFDKAT LKAVTKWKYQ PAFENGKPIQ QCVNTVQMDY
RMGKNVGTKG VSRRFKKKYE IATQALKDKD YQAVEHQLAK MNARKTMHLS ENNYMHILAA
NYAREIGNDT LQLYHLDRVT LDSGVKSENL KFSVLYQQFY LETTLSKFQS AFATYKQLIK
LEEAKPYLAK LKKVMADIDS VISSDKDIVI DAAIDSDYWY ADLVRNEFSL TNIEGSLHTL
DVRCANKRHV YTVENNNTWR IPTSWMNCSI YVYGEPKTSF NLIEHPVDI
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