| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4789 |
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| Symbol | |
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| ID | 3519991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5070496 |
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| End bp | 5072391 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287228 |
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| Product | beta-ketoacyl-ACP synthase family protein |
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| Protein accession | YP_271428 |
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| Protein GI | 71279532 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.718559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGTT TACCTTTAAT TATTGGCATG GGCGGTATTA ATGCTTCAGG CCGTACCTCA
TTTCATCAAG GCTTCCGACG TATAGTAATC GATAAATTAA CTGCTCAAGC ACGCCAAGAA
ACATTTGTCG GATTAGCAAG CTTAATGAAA ATTGTCACAA AAAAAGATGG TGCTTTAGTT
GATGGTGACG GTAACCTTGT TTTAGCTGAA GAGATCGAAA GCAAGTTTGG GCAAAAAATT
CTTGCTGGTA CCCTAATTCG TAAAATTGAA AAAAACCATT TTGATCCTGA TGCGACTCAC
TGGCATCAAA AAATGAATGT CACGCCTACA GATAAGCCTA TAGCGTTTGA ATTACGTGCT
AAAGAATTAC CTCAACCGGT ACCAAGTTCA TGGTTGGTTA CTGACTTAGG TGCAGGTAGA
GTTTCTGTCG AAATTCCTGA GCAACTAACA ATTACTCACG ATTCGTACCG TGATAATCCG
ATTAAAGCCG CGGGTCAATT TCCTACAGGA TTCGATCCTA CTGAGCTTTA CAAAAGTCGA
AACCATCCGC GCGGTTTGCA AGTAACAATC TTTGCGGCGA CAGATGCTAT TCGCTCTACC
GGATTAGAAT GGGATGCTAT TCTAGATAAA ATTAGTCCCG ATGAAGTTGG TACCTACTCA
GCTTCAATAG CAGGACAAAT GCATGATGAA GGCTTTGGTG GCTTAGTTAA AAGCCGTTTA
ACCGGTTCTC GTGTCAGCTC TAAGCAATTA GCGCTGGGAC TTAATACTAT GTCTACCGAT
TTTATCAATG CTTATGTTAC TGGCAATGTT GGTACTACTT TTACTAGCTC AGGTGCTTGT
GCAACATTTT TGTATAACCT ACGTGCCGCA ACACATGATA TGGCCGCTGG CCGAACACGT
ATCGCTATTG TTGGTAGTAG TGAAGCGCCT ATTACGCCAG AGATGATTGA AGGCTTTGGC
AACATGAGTG CATTAGCCAA CGAAGAAGGG CTAAAAAAAC TTGATGGTAC TGATACTGCT
GATCATCGTC GAACTAGCCG TCCATTTGGT CAGAACTGTG GTTTTACTAT GGGTGAAGGC
GCACAGTTTG TTGTCTTGAT GGATGATGCG CTTGCCTTAG AGATGGGCGC AAAAGTACTC
GGCTCTGTTG CCGACGTTTT CATTAACGCT GACGGTTACA AAAAATCAAT TACCGCACCA
GGACCTGGTA ACTATATTAC CATGGCCAAA TCCGTTGCTT TAGCAGAGCA AGTTTTAGGT
AAAGAAGCAT TACAAGAACG TAGCTTTATT TTGGCGCACG GTTCTAGTAC CCCACAAAAT
CGCGTTACTG AGTCATTAAT TTATCATAAA GTTGCAGAGT GTTTTAACAT TGAAAATTGG
CCGGTTGCTG CACCTAAAGC GTATATTGGT CACACCTTAG GCCCTGCAAG TGGCGATCAA
ATGGCAATGG CATTAGGTAT TTTTAGTGAT AATATTATGC CCGGTATTAC CACTATTGAT
GAAGTTGCTG AAGACGTTCA TAACGAACAC CTTAATATTG CTACAGATCA TTGGCACTGC
CCTGATATGG ATATCGCTTT TATCAATTCA AAAGGCTTTG GTGGCAATAA TGCAACCGCG
ACTGTTTTTT CTCCAAAAGT AAGTTTATCA ATGATGGAGA AACGTTATGG TGCAGAGGCA
ATGGCAACTT ACCAACAGAA GTTAATTGAA GTAGAACAAG CCCAGCAAGT GTATCGTGAT
AACGCTAATG ATGGTCAGTT TGATTTAATT TACAAATTTG GTGAAGGTCT GATCGATGAA
GCCAATATTG AATTAACTAA CGATAGTTTA CGCTTCACTG AATTCAAAAA TAGCATCGCA
CTACCTAGCA AAAACCCTTT TGATGATATG GTTTAA
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| Protein sequence | MTRLPLIIGM GGINASGRTS FHQGFRRIVI DKLTAQARQE TFVGLASLMK IVTKKDGALV
DGDGNLVLAE EIESKFGQKI LAGTLIRKIE KNHFDPDATH WHQKMNVTPT DKPIAFELRA
KELPQPVPSS WLVTDLGAGR VSVEIPEQLT ITHDSYRDNP IKAAGQFPTG FDPTELYKSR
NHPRGLQVTI FAATDAIRST GLEWDAILDK ISPDEVGTYS ASIAGQMHDE GFGGLVKSRL
TGSRVSSKQL ALGLNTMSTD FINAYVTGNV GTTFTSSGAC ATFLYNLRAA THDMAAGRTR
IAIVGSSEAP ITPEMIEGFG NMSALANEEG LKKLDGTDTA DHRRTSRPFG QNCGFTMGEG
AQFVVLMDDA LALEMGAKVL GSVADVFINA DGYKKSITAP GPGNYITMAK SVALAEQVLG
KEALQERSFI LAHGSSTPQN RVTESLIYHK VAECFNIENW PVAAPKAYIG HTLGPASGDQ
MAMALGIFSD NIMPGITTID EVAEDVHNEH LNIATDHWHC PDMDIAFINS KGFGGNNATA
TVFSPKVSLS MMEKRYGAEA MATYQQKLIE VEQAQQVYRD NANDGQFDLI YKFGEGLIDE
ANIELTNDSL RFTEFKNSIA LPSKNPFDDM V
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