| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4788 |
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| Symbol | |
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| ID | 3519979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5069311 |
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| End bp | 5070345 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637287227 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_271427 |
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| Protein GI | 71279520 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.139915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAATA AGCGGATAAA AATAGATTAT CTAACAAATA AGTTAACGGT AAATTTAGTT
ATTTATCCGC ATGTATTAGC CACGGGAGTT ACTTTACCCA TAGAGATGTT ACTCGCTGGT
GAGGCTTTTG CTAGGCGTTA TGATAAATCA GTATTAAAAC TAGACACGCA ATTTTTAAGT
GAATCGTCAG TTAAAATAAA GTCACGTGCA GGCATTACCA TGGTTGCCGA TATCACCCTT
GATAGTGAAT TATTAGTTAA ATCAACCCCA CCTGATATTA TTATTGTGCC CAGTTTGTGG
CGTAATCCTC GCCCCGTACT TAAAAGTCAT GAAAAATTAG TTGCTTGGTT AAAGCATTGC
TGGCAGCAAG GAAGTACTTT AATTGGTGTT GGCACTGGGG TGTGCTTTTT GGCAGAGTCA
GGTTTATTAG ATAATCACTC AGCAACCACG CATTGGCATT ATGTTGAGCA ATTTAAGCGA
GACTATCCAC AAGTTGATTT AAAGCCCGAT TTCTTTATTA CGCAATCTGA ACGTATTTAT
TGTGCAGCTA GCTTAAATGC ATTGGCAGAC ATTATTGTTC ACCTAATCGC TCAGCATTAC
GGTAAAGAAG CGGCACAAAA TGTAGAACGA AATTTCTCCC ATGAAATACG CAAGCCTTAT
GAGGAACAAC GTTATTTGGA GGGATCGGGT GATAGGCATG CGGATGAATT GATTGCTGAA
ATTCAATTTT GGCTACGGAC AAATTTAAAT ACTGAATTAA CCCTGACAGA AATTGCTAAG
CAATTTGGTA TGAGTCAACG CTCATTTACC CGCCGGTTCA AAGCGGCAAC GGGCGTTCGT
GCGACACAAT ACTGGCAGCA GTTAAGAATA GAAACAGCAA AAGAACTATT GGCATCAAGT
AATTTAACTA TTCAAGAAAT AGCAGATCAG GTGGGTTATC AAGATCAAGG ACATTTAACT
CGATTATTTA AGAAAGACTT ACATTTAACG CCGAAAGCTT ATCGCGCTAT GGTAAGGAAA
AAACTGTTCA GTTAA
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| Protein sequence | MPNKRIKIDY LTNKLTVNLV IYPHVLATGV TLPIEMLLAG EAFARRYDKS VLKLDTQFLS
ESSVKIKSRA GITMVADITL DSELLVKSTP PDIIIVPSLW RNPRPVLKSH EKLVAWLKHC
WQQGSTLIGV GTGVCFLAES GLLDNHSATT HWHYVEQFKR DYPQVDLKPD FFITQSERIY
CAASLNALAD IIVHLIAQHY GKEAAQNVER NFSHEIRKPY EEQRYLEGSG DRHADELIAE
IQFWLRTNLN TELTLTEIAK QFGMSQRSFT RRFKAATGVR ATQYWQQLRI ETAKELLASS
NLTIQEIADQ VGYQDQGHLT RLFKKDLHLT PKAYRAMVRK KLFS
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