| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4772 |
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| Symbol | rplA |
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| ID | 3518789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5057189 |
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| End bp | 5057887 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287211 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_271416 |
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| Protein GI | 71278611 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0687152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT TATCAAAACG CGCTCGTCTT ATCCGTGAAA AAGTAGACGT AACAAAAGAA
TATGATATCA ATGAAGCAGT TTCTTTATTA AAAGAATTTG CTACAGCTAA CTTCCGTGAA
AGCGTTGATG TTGCTGTAAA TCTTGGTATT GACGCTCGTA AATCAGATCA AAACGTTCGT
GGCGCTACAG TATTACCAAA TGGTACTGGT CGTGAAGTAC GTGTTGCTGT ATTTACACAA
GGCGAAAACG CAGAGAAAGC TAAAGCAGCT GGTGCTGACA TCGTTGGTAT GGAAGATTTA
GCCGCGCAAG TAAAAGCCGG TGAAATGAAC TTCGACGTTG TTATTGCTTC TCCAGATGCA
ATGCGTGTTG TTGGTCAACT AGGTCAAATC TTAGGCCCTC GTGGTTTAAT GCCTAACCCT
AAAGTTGGTA CAGTAACTCC TGACGTAGCT GGCGCTGTTA AAAACGCTAA GTCTGGTCAG
ATCCGTTACC GCAACGACAA GAACGGTATC ATCCATACTA CTATTGGTAA GGCTGATTTC
GAACCTGCAC AATTGCAAGA AAACTTAGAG TCTTTGCTAG AAGCGCTTAA AAAAGCAAAA
CCTGCAAATG CTAAAGGTCA ATACTTGAAG AAAGTTTCTC TTTCTACAAC TATGGGTGCC
GGCGTTGTCG TCAACCAAGC AACACTAACT CAAGCTTAA
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| Protein sequence | MAKLSKRARL IREKVDVTKE YDINEAVSLL KEFATANFRE SVDVAVNLGI DARKSDQNVR
GATVLPNGTG REVRVAVFTQ GENAEKAKAA GADIVGMEDL AAQVKAGEMN FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPDVA GAVKNAKSGQ IRYRNDKNGI IHTTIGKADF
EPAQLQENLE SLLEALKKAK PANAKGQYLK KVSLSTTMGA GVVVNQATLT QA
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