Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4771 |
Symbol | rplJ |
ID | 3522127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5056329 |
End bp | 5056823 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637287210 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_271415 |
Protein GI | 71281655 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.709091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTATCA ATCTTGATGA CAAAAAAGCA ATTGTTGCTG AAGTTCAAGA AGCTGCTAAT GGCGCTCACT CAGTTGTAAT CGCGGATGCC CGTGGTGTTG CAGTTGAAGC AATTACTGTA TTGCGTAAGC AAGCACGTGA AAATGGTGTA TGGATGAAAG TTGTCCGTAA CACATTAGCA CGTCGTGCAG TAGAAGGTAC TGAATTTGAA TGTGTTTCTG ACGTATTCAA AGGTCCTTCA TTAATTGCTT TTTCAAGTGA TCACCCAGGT GCTGCTGCAC GTTTATTCAC AGATTTCGCT AAAGCTAACG AAAACTTTGA ATTAAAAGCA GCTGCATTTG AAGGCAACGC AGTAGACGTA AATATGTTAG CTAAGCTACC TACTTACGAC GAAGCGATTT CACGTTTGAT GAGCGTTATG AAAGAAGCAT CTGCAGGCAA ATTAGCCCGC ACGTTTGCTG CTATACGCGA TCAGAAAGAA CAGGAAGCTG CATAG
|
Protein sequence | MAINLDDKKA IVAEVQEAAN GAHSVVIADA RGVAVEAITV LRKQARENGV WMKVVRNTLA RRAVEGTEFE CVSDVFKGPS LIAFSSDHPG AAARLFTDFA KANENFELKA AAFEGNAVDV NMLAKLPTYD EAISRLMSVM KEASAGKLAR TFAAIRDQKE QEAA
|
| |