| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4745 |
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| Symbol | birA |
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| ID | 3521849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5023570 |
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| End bp | 5024571 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287184 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_271389 |
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| Protein GI | 71281377 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.167382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA CAGTTAAAGA GCACTTAGTT AAGTCATTAG CCTCAGGTCA ATTTATTTCA
GGACAGTTGC TCGGTGAGCA ATTAGGCATC AGTCGTACTG CTATCGCTAA ACATATTAAA
GTATTAACCG AAATTGGCTT AGATATTTAC AGTGTCACCG GTAAAGGTTA CAAGCTGGCG
CAGCCGCTGT ACTTATTAGA GAAAGACAAA ATTATCAGTC TATTGGCTGA TGAAAAAAAC
CCGCAAGCTG AAAAGCAAAG CGACTTACCA TTGATTGAAG TGCATAGCTT AATTGACTCT
ACTAATGATT ATTTAATGAG GCGTTTGCCT AATCAAGTAA CATCAGGGCA GGTTTGTTTA
GCTGAATATC AAAGTGCTGG TCGAGGTCGT CGTGGTAGGC AGTGGATTTC ACCTTTTGGC
TCGCAAATAT ACTTGTCTAT GTACTGGTAC TTAGAACAAG GATTATCAGG GGCTATGGGA
TTAAGTTTAC TAACGGCACT AGCGGTCAGC GATGCAGTAA AAGCCCATAG TAACGTACAA
GTTCAGTTGA AGTGGCCTAA TGATATTTAT CTTGATGGCG TCAAGCTCGC AGGTATCTTA
ATTGATCTTG AAGGGCAGGC ATTAGAGCCT AGTCATTGTG TTATTGGCAT TGGTTTAAAT
CTACATATGC CAGTGGACGC AGGTAAATTA ATTGAACAAA AATGGACAGA TCTACAATCA
CACAGTAAAG TCAAAATCGA TAGAAATGGA CTCAGTGCAC AATTAATCAG TTGTTTACGA
AAGCGATTAC AACAACATCA GCAAGTGGGT TTAGTGCCGA TGTTAGAAGA GTGGCATGCT
CATGATGCTT TTTTAAATAA GCGGGTAAAA TTAATTACCG GCGAACGAGT AACTCACGGC
ATATGTCGAG GAGTTAATAA CCAAGGTGCT TTACTGCTAG AGGTCGACGG GCAAGTTAAA
CCAGTCTACG GTGGTGAAGT AAGTCTTAGG ATGGACGAAT GA
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| Protein sequence | MTKTVKEHLV KSLASGQFIS GQLLGEQLGI SRTAIAKHIK VLTEIGLDIY SVTGKGYKLA
QPLYLLEKDK IISLLADEKN PQAEKQSDLP LIEVHSLIDS TNDYLMRRLP NQVTSGQVCL
AEYQSAGRGR RGRQWISPFG SQIYLSMYWY LEQGLSGAMG LSLLTALAVS DAVKAHSNVQ
VQLKWPNDIY LDGVKLAGIL IDLEGQALEP SHCVIGIGLN LHMPVDAGKL IEQKWTDLQS
HSKVKIDRNG LSAQLISCLR KRLQQHQQVG LVPMLEEWHA HDAFLNKRVK LITGERVTHG
ICRGVNNQGA LLLEVDGQVK PVYGGEVSLR MDE
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