Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4710 |
Symbol | |
ID | 3520406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4984112 |
End bp | 4985002 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637287149 |
Product | hypothetical protein |
Protein accession | YP_271354 |
Protein GI | 71279943 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAT TAGTAACCGG TGGTACAGGT TTAATTGGTC GACACTTTAT TAGTGCTTTT AATCACAAAT ATCAATTCAC TGTTTTAACG CGCAACACTC AAAAAGCACA ACTATATTTA CCTAAAAACA TTGAGTTTAT TGAACAGTTA CCAGAGCAAA ATTATTTTGA TGTGATCATT AACCTTGCCG GTGAGCCTAT TATTGATAAA CGCTGGAGTC GCGCACAAAA AGAAAATATT TGTCAGAGTC GATGGAACAT CACTGAAAAA ATAGTTGAAA TGATTGCACG CGCCACGGAT AAACCAAGTT GTTTAATTAG TGGTTCAGCC ATAGGTTATT ATGGTGAAAC GGGTGCTGTA TCAACGCATG AAGATGCAAA AGTTACTCAT TCTGATTTTG CGCACACCCT CTGCCAAAAG TGGGAGGAAC TTGCACTTAA AGCCAAAGAA CACTGTCGTG TGGTGTTATT ACGTACTGGT ATCGTATTAG CAAGTGATGG TGGAGCATTA GAGAAAATGC GTTTACCCTT TTCTTTAGGT TTAGGCGGAA AACTTGGTAA TGGCCAACAA TATATGTCCT GGATACATAT AGATGACATG ATTCACGCTA TTCATTTTAG TGTACAAATA AAGTGTATTG AAGGTGCTAT TAATTGCACT TCTCCTAAGG CAATAACTAA TGAAGTGTTT ACTAAGGCAT TAGGCAAAGA AGTTAATCGG CCCACTTGGT TTAGCGTACC TGCATTTGTA TTAAATATTT TAATGGGACA AGGTGCAGAG CTATTATTGA CAAGCCAGAA TATTTATCCG CAAAAATTGC TCAGTCATGG TTTTCATTTT AACCATAGCG ATATTGAACA TGCACTTGCA GATTTAATGA CTGAATCTTA A
|
Protein sequence | MKILVTGGTG LIGRHFISAF NHKYQFTVLT RNTQKAQLYL PKNIEFIEQL PEQNYFDVII NLAGEPIIDK RWSRAQKENI CQSRWNITEK IVEMIARATD KPSCLISGSA IGYYGETGAV STHEDAKVTH SDFAHTLCQK WEELALKAKE HCRVVLLRTG IVLASDGGAL EKMRLPFSLG LGGKLGNGQQ YMSWIHIDDM IHAIHFSVQI KCIEGAINCT SPKAITNEVF TKALGKEVNR PTWFSVPAFV LNILMGQGAE LLLTSQNIYP QKLLSHGFHF NHSDIEHALA DLMTES
|
| |