| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4705 |
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| Symbol | |
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| ID | 3520420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4980365 |
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| End bp | 4981783 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287144 |
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| Product | sensory box sensor histidine kinase |
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| Protein accession | YP_271349 |
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| Protein GI | 71279957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.738768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCACT CTACCGCCGG ATGGAAAAAC ATGGACTTTA AACGCTTTTC ACTCTTAATA
GCCACGCGCA CTATTTTAGC CATGCTCACG TTGATTTTTC TCACGCAAGC AATTATGAGT
GATGGTTATC ACGCGACCGT ACTGTTGCTT TCGGCAGTAT TACTGATACA GTTCTTTGAA
ATAACACGTT TTATTTCAAA GACCAATGCA GAATTAGTCC GCTTTTTTGA AGCCGTCCGC
CATGCCGATT TTTCACAACG CTTTGAGCTA AAATCCCTTG GTACAGGATT TGATGAATTG
GGTTCCACCT TTACTGATAT TCTAAAACGT ATTCAACGTG TGCGTTCAAA TCAAGAGGCC
GAACTACGAC ATATTAAAGC CATTATTGAA CATGTCCCAG TACCGCTGTT AAGTATTGAT
CATAATGGTA AAATTACTTT ATGGAACAAT AGCGTCAGGC GCTTATTTGG TACCAATGCA
GTCACCCATA TAGATGATAT GGCACAGTTT AATGAAGACT TCCCAAAAAA ATTACAAAGT
ATTTTAGCGG GTGAGCGCAC ACTAGTTCAT ATCACTATTG ATGACATGGA ACATAAGCTC
ATTATCTCGG CGACTGAAAT AACGACAGCA ACACAGCAAG AAACCTTACT GAGTATGCAA
GATATTCAAA GTGAGCTAGC ACTAGCTCAA TTGCAAGCAT GGCAAGACTT GGTCAGTGTC
TTAACTCACG AGATAATGAA TAGTATTACG CCGGTAGCAT CACTGGCTAA AACAGCTGTA
GATTTAGTTC AAGATGTACA AGAAAAAACC CGGACCTTAC CCGCTATTAC CAACGAGATA
ACTGAAGAAT TAGACGATGT ATTAGGAGCA GTAAAAACTG TCGCTAGGCG AAGTGATGGC
TTAATGCAGT TTGTCACCAG CTACCGTCGT TTAACACGCC TGCCCTCGCC TAATAAAAAA
ACAATATCAG TAGCGACTAT ATTCGACCAC GTCACAACGT TAGCCAAGCA GAATTGGCAA
AAAGATAACA TTGAACTAAC CGCGAGCATC ACTCCTCAAG CTTTAGATAT TCATGTTGAT
CCAGATATGA TCGAACAAAT ATTGCTTAAC TTATTGTTAA ATGCTGAACA CGCGTTAATT
ACAACAGCAG GAGTAATAGA GAAGAAAAAC AGTACACCAA AAATAGCATT AAACGCATTT
TTAAATGTCC GTGGCCATGT CATCATTGAA GTTGCTGATA ATGGTAAAGG TATTGAAAAT
AAAAACATGA CACAAATTTT TGTACCCTTT TTCACTACCA AAAAAGAAGG CTCGGGTGTC
GGTTTAGCTT TAACAAGACA AGTGATGTTA GCTCATAATG GCAAGGTTGC TGTGCGTAAC
AATAGCCAAG GTGGCGCAAC CTTTAGTTTA ACTTTTTAA
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| Protein sequence | MLHSTAGWKN MDFKRFSLLI ATRTILAMLT LIFLTQAIMS DGYHATVLLL SAVLLIQFFE
ITRFISKTNA ELVRFFEAVR HADFSQRFEL KSLGTGFDEL GSTFTDILKR IQRVRSNQEA
ELRHIKAIIE HVPVPLLSID HNGKITLWNN SVRRLFGTNA VTHIDDMAQF NEDFPKKLQS
ILAGERTLVH ITIDDMEHKL IISATEITTA TQQETLLSMQ DIQSELALAQ LQAWQDLVSV
LTHEIMNSIT PVASLAKTAV DLVQDVQEKT RTLPAITNEI TEELDDVLGA VKTVARRSDG
LMQFVTSYRR LTRLPSPNKK TISVATIFDH VTTLAKQNWQ KDNIELTASI TPQALDIHVD
PDMIEQILLN LLLNAEHALI TTAGVIEKKN STPKIALNAF LNVRGHVIIE VADNGKGIEN
KNMTQIFVPF FTTKKEGSGV GLALTRQVML AHNGKVAVRN NSQGGATFSL TF
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