| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4702 |
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| Symbol | |
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| ID | 3520880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4977045 |
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| End bp | 4978340 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287141 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_271346 |
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| Protein GI | 71280414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA ATACCACACC GCTCACTTCT GTAACTAATG CCGTTTCGGG TGCAGGAATG
GATCGTAAAG TCACCACCAA TGCTAGCCCA ATGAAAAAAT GGCTAAGTCT AACCTTGATC
ATGCTCATCG TTGTTTTTGC GGGTTATATG ATCGCTAGTA AGAGTACGGG GAAAGTATTA
TCAGTAGATA ATAGCCGGGT AGTTATTTCA AAAGTAACTT CAGGAGTTTT TGAAGATTTC
ATCCCTATCC GTGGTCGAGT TACGCCGGCA AAAACAGTTT ATTTGGATGC CATTGAAGGA
GGACGTGTAG AAAAGATTCT AGTGGAAGAT GGCGCGAGCT TAACGGCGGG TAATCTTATC
GTAGAGTTGT CAAATGCTTC ACTGCAACTC AGTGTATTAG GCAATGAAAC ACGCGTCGCA
GAGCAACTAA ATAATATGCG CTCTATTGAG TTAAATTTAG AGCAGAATCG TCTACAACAT
AAACGTAACA TCGTTGATAT TAAGCACCAA ATTAAATTGT TAACTCGCCA AGTTGACCGT
TCACAATCGC TTATCGCAAC GGGTGCGATT ACCAAATCGA AAATGGAAGA TACTGAAGAT
ACCTTAACTT GGTATCAAGA CCGATTGGCG CTAACTATTG AAAGTCAGCA ATCAGATGCT
CGTATGCAAG GAGAGCAACT CACGTTTTTA AGATACACGA GTCGTCGTTT AGAAAGTAAC
TTGGCTATTT CACGTCAAAA TTTAGACAAC ATGAATGTTA AAGCGCCGGT AGCAGGTAAG
TTATCTGGCT TTAATGTTGA AGTAGGCCAA AGCATTGCCC GCGGTGAGCG TCTTGGACAA
ATAGATACAC CTAACGATTA TAAGCTCACT GCTTTTATTG ATGAATTTTA CCTAGGCCGT
GTCGATATTG GTCAAACGGC GACCTATAAA AATTACTCCT TAGTCATTGC CAAAGTCTAT
CCACAAGTGC AAAACGGTCA ATTTGAAGTC GATTTTAAAT TTACCTCCGA GCAGCCCAAA
GGCATTCGCC GCGGACAAAC CATTCAAATC AAGCTGACAC TTGGCGATGC GAGTGAAGCA
CTGTTGATCC CCAATGGTGC CTTTTTTCAA GATACTGGCG GCAAGTGGAT GTTTGTTGTT
AGCCCAAATG GTAGCGAAGC GGTGAAGCGT AATGTGCGCC TAGGACGACG AAATAACCAA
TTTATAGAAG TTATTGAAGG ACTTGAACTT GGTGAACAAG TTGTCACTAG CCCTTATAGC
AGCTACCAAG AGATGCAGCG CCTTAACTTT AATTAG
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| Protein sequence | MTKNTTPLTS VTNAVSGAGM DRKVTTNASP MKKWLSLTLI MLIVVFAGYM IASKSTGKVL
SVDNSRVVIS KVTSGVFEDF IPIRGRVTPA KTVYLDAIEG GRVEKILVED GASLTAGNLI
VELSNASLQL SVLGNETRVA EQLNNMRSIE LNLEQNRLQH KRNIVDIKHQ IKLLTRQVDR
SQSLIATGAI TKSKMEDTED TLTWYQDRLA LTIESQQSDA RMQGEQLTFL RYTSRRLESN
LAISRQNLDN MNVKAPVAGK LSGFNVEVGQ SIARGERLGQ IDTPNDYKLT AFIDEFYLGR
VDIGQTATYK NYSLVIAKVY PQVQNGQFEV DFKFTSEQPK GIRRGQTIQI KLTLGDASEA
LLIPNGAFFQ DTGGKWMFVV SPNGSEAVKR NVRLGRRNNQ FIEVIEGLEL GEQVVTSPYS
SYQEMQRLNF N
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