Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4701 |
Symbol | |
ID | 3522618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4976231 |
End bp | 4976923 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637287140 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_271345 |
Protein GI | 71282145 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.91334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC TACATAATTT AACACGCGTA TATCAAACTG AAGATGTAGA AACATCAGCC TTAAACAATG TAAATATTGA AATTGCCCAA GGCGAGTTTG TTGCCATTAT GGGACCATCA GGTTGTGGTA AATCAACCTT ACTTAATACT ATTGGTATGT TGGATTCACC CAGTAGTGGT GATTATATCT TTAATGGCGA AAATGTTGCT GGTTATTCAG AAAAACAGCT TTCCGTTATT CGTAAAAAAA GCATTGGTTT TATCTTTCAA AACTTTAATT TGATTGATGA GTTAACCGTT GCTGAAAATA TTGAATTAGC CTTAATTTAT CACAATATTC CAGCAGCAGA GCGCAAAGCT AAAGTTGAAA AGGTCATGGA TAAAGTGGGT ATTGCCCATC GCGCTAAGCA CTTACCAAGT CAGTTATCTG GCGGGCAACA ACAACGAGTC GCAGTCGCTA GAGCGGTTGT TGGTGATCAA AAAATGATTT TGGCCGATGA ACCAACGGGT AATTTAGACA GTGCACACGG TCAAGAAGTA ATGGAAATGT TACAAGCACT TAACGATGAA GGCACTACTA TAGTGATGGT GACACATAGC CCAGCACATG CTGATTACGC TAGACGTACT ATCAATTTAT TTGATGGTCA TGTGGTTGCA CAAAGTGTTC GTGCTGCTGA GCAAACGGCT TAA
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Protein sequence | MLKLHNLTRV YQTEDVETSA LNNVNIEIAQ GEFVAIMGPS GCGKSTLLNT IGMLDSPSSG DYIFNGENVA GYSEKQLSVI RKKSIGFIFQ NFNLIDELTV AENIELALIY HNIPAAERKA KVEKVMDKVG IAHRAKHLPS QLSGGQQQRV AVARAVVGDQ KMILADEPTG NLDSAHGQEV MEMLQALNDE GTTIVMVTHS PAHADYARRT INLFDGHVVA QSVRAAEQTA
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