Gene CPS_4701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4701 
Symbol 
ID3522618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4976231 
End bp4976923 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID637287140 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_271345 
Protein GI71282145 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.91334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAC TACATAATTT AACACGCGTA TATCAAACTG AAGATGTAGA AACATCAGCC 
TTAAACAATG TAAATATTGA AATTGCCCAA GGCGAGTTTG TTGCCATTAT GGGACCATCA
GGTTGTGGTA AATCAACCTT ACTTAATACT ATTGGTATGT TGGATTCACC CAGTAGTGGT
GATTATATCT TTAATGGCGA AAATGTTGCT GGTTATTCAG AAAAACAGCT TTCCGTTATT
CGTAAAAAAA GCATTGGTTT TATCTTTCAA AACTTTAATT TGATTGATGA GTTAACCGTT
GCTGAAAATA TTGAATTAGC CTTAATTTAT CACAATATTC CAGCAGCAGA GCGCAAAGCT
AAAGTTGAAA AGGTCATGGA TAAAGTGGGT ATTGCCCATC GCGCTAAGCA CTTACCAAGT
CAGTTATCTG GCGGGCAACA ACAACGAGTC GCAGTCGCTA GAGCGGTTGT TGGTGATCAA
AAAATGATTT TGGCCGATGA ACCAACGGGT AATTTAGACA GTGCACACGG TCAAGAAGTA
ATGGAAATGT TACAAGCACT TAACGATGAA GGCACTACTA TAGTGATGGT GACACATAGC
CCAGCACATG CTGATTACGC TAGACGTACT ATCAATTTAT TTGATGGTCA TGTGGTTGCA
CAAAGTGTTC GTGCTGCTGA GCAAACGGCT TAA
 
Protein sequence
MLKLHNLTRV YQTEDVETSA LNNVNIEIAQ GEFVAIMGPS GCGKSTLLNT IGMLDSPSSG 
DYIFNGENVA GYSEKQLSVI RKKSIGFIFQ NFNLIDELTV AENIELALIY HNIPAAERKA
KVEKVMDKVG IAHRAKHLPS QLSGGQQQRV AVARAVVGDQ KMILADEPTG NLDSAHGQEV
MEMLQALNDE GTTIVMVTHS PAHADYARRT INLFDGHVVA QSVRAAEQTA