Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4691 |
Symbol | |
ID | 3520740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4962351 |
End bp | 4963253 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637287130 |
Product | LysR family substrate binding transcriptional regulator |
Protein accession | YP_271335 |
Protein GI | 71280276 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAATG CTAGCGAATT GGCTTTGTTT TCATTAATTG TTGAAGCTAA ATCCTTCAAT AAAGCTGCCC AGTTGGCAGA AATATCACCA GCAGCACTGA GTAAAAAAAT ATCTAAACTT GAGAAAAATT TAGGCATTCA ATTGTTGTAT AGAACAACAA GACGATTAAG TTTAACGGAG GCAGGCGAAA TACTTTACAG CCACTCTAAG GATATTAATA AGCAAGTAAA TGATGCAGTT AGTGCCGTTA GTAGTTTTAG CGAAGGTCTA TCTGGCACCA TAAAAATGAC AGTGCCAACC ATTTCAGGGG AATTAATACT CGCGCAAGCG GTTGCTGAAT TTTGTCAGCT ACATCCCAAA TTAAGTGTTG AAATGCGCTT AGAAAATGAG TTTGTTGATT TGATTAAAGA AGGACAAGAT TTAGCAATTA GAACGGGTGT ATTAAGTGAC TCTAGTTTAA TAGCAAAACC GCTACTGCAG TCAAATTGGA TCGTATGTTG TGCGCCATCT TACATTGAAA AGCATGGTAC CCCACAAACA CCTCAAGAAT TATCCCGACA CAACTGCATG GCATACACCT ATCAAGACAA AGGTGCGCAT GATTGGTATT TTAGTCAGTC AGACGAAGCC TATTATGTAA AAATTTCAGG AAACTTTGCC ACGAATAACT CACAAGCATT ACGTAAAGCA GCTCTGGCAG GGTATGGCAT TGTCTATGTG CCACGCTGTA GTGTTTATGA TGATATGCAA CGGGGTGACT TAGTACAATT GTTACCTGAA TTTCATGGCC GTCAATTAGG CATTTATGCG GTATATCCTT ATACCAAACA TCAGTCTCAA AAAGTACGCC TGTTAATTGA GCATATAAAA GATTGCTATC AACAACAGGC CGAATACTTC TAA
|
Protein sequence | MPNASELALF SLIVEAKSFN KAAQLAEISP AALSKKISKL EKNLGIQLLY RTTRRLSLTE AGEILYSHSK DINKQVNDAV SAVSSFSEGL SGTIKMTVPT ISGELILAQA VAEFCQLHPK LSVEMRLENE FVDLIKEGQD LAIRTGVLSD SSLIAKPLLQ SNWIVCCAPS YIEKHGTPQT PQELSRHNCM AYTYQDKGAH DWYFSQSDEA YYVKISGNFA TNNSQALRKA ALAGYGIVYV PRCSVYDDMQ RGDLVQLLPE FHGRQLGIYA VYPYTKHQSQ KVRLLIEHIK DCYQQQAEYF
|
| |