Gene CPS_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4687 
Symbol 
ID3518524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp4957131 
End bp4957817 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content39% 
IMG OID637287126 
Producthypothetical protein 
Protein accessionYP_271331 
Protein GI71278852 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA CAAAAGCAGA TATCAAAGCA GTCAGTAATA CCGCGCGTGG CAATATTCTT 
GCTAAGTTGA AAGCGGAGGT CAAGGGGGCA GATTATGAAA AATTGCCTGA AGAAGTCCCT 
TATAATTACC CTGAATTTAG TCGTGAAGAA AATTTAGCTC AGTTTATTTC TGAACTTGAG 
AAAAACCATG CTCAAGTGAT CAAAACAACT AAAGAAAATA TGGCCGAGGT TATCAGCGAG 
CAGCTTAAGG CACTAAATAT CTCTAAATTG CTTTATGGTG AAAATGATTC TCACCGTGAG 
GTTATCAATG CACTAGATGG CAAAGTAGAT CTACAAGTCT ATGATTTTTC AATTGATAAT 
AATAAAGAAA TGCTCTTTAA TGAATGCCCA GCCGCTTTAT CAAGCTCGCA TTGCTCAATT 
GCTGCAACAG GTAGCATAGT CTTATGGCCA GACGAAAATG AGCCACGAAG CTTAACCTTG 
GTGCCGCCAG TGCACTTTGT TATTGTCGAT GCCAATAAAT TATATGCTGA CTTTGGTAGC 
TTAATGACTT CGCAACAATG GCAAGATAAA TTACCGACCA ATGTTGTCTT AGTATCAGGA 
CCATCGAAAA CTGCTGACAT TCAGCAAACG TTAGCTTATG GTGCTCACGG CCCGAAAGCG 
CTTATTGTTT TATTAATAAA TATTTAA
 
Protein sequence
MTNTKADIKA VSNTARGNIL AKLKAEVKGA DYEKLPEEVP YNYPEFSREE NLAQFISELE 
KNHAQVIKTT KENMAEVISE QLKALNISKL LYGENDSHRE VINALDGKVD LQVYDFSIDN 
NKEMLFNECP AALSSSHCSI AATGSIVLWP DENEPRSLTL VPPVHFVIVD ANKLYADFGS 
LMTSQQWQDK LPTNVVLVSG PSKTADIQQT LAYGAHGPKA LIVLLINI