| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4686 |
|---|
| Symbol | |
|---|
| ID | 3518883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4954268 |
|---|
| End bp | 4957102 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637287125 |
|---|
| Product | oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein |
|---|
| Protein accession | YP_271330 |
|---|
| Protein GI | 71278510 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCTG AGCATTATCA ATTGCTTGCT AAGCAAGTGG CAGAGTTTAT TCCTGCATCA
CGTATTATTA CCGATTATAC TCGACGTTTA GCTTATGGCG TTGATGCAAG TTTCTATCGC
TTAGTACCAC AATTAGTACT TATTTTAGAT GACGAAGCTG AAGTGGTAAG GGTCATTAAA
GCTGCAGCAC AAGCAAAGTT GCCGGTAACA TTTAGAGCTG CTGGTACCAG CCTTTCGGGT
CAGGCCCAAT CTGACTCAAT TTTAATTATG CTCACTAATA GCTGGCGTGA CCATGAAATA
TTAGATCTCG GTCTAAAAAT CAAACTGGGA CCTGGCGTGA TAGGTGCTGA CGCTAACAAG
TATTTATTAC CTTATGGACG AAAAATAGGC CCTGATCCTG CTTCAATTAA TACCTGTAAA
GTTGCAGGTA TTGCCGCTAA TAATGCCAGT GGTATGTGTT GTGGTGTTGC ACAAAACAGT
TATCAGACGC TTGATAATAT TCGCCTTGTT TTACATGACG GTAGCATCCT TGATACCGCA
GATGAAGCAA GTATTTCAGC GTTTAAAACT AGCCATACCC AATTATTAGA ACAGTTAGAT
ACACTGGCTA CTAAAACTCG TAGCGATGGG ACGTTAAGTG CGTTAATTAA GCATAAATAT
CGATTAAAAA ATACCACGGG TTATGCAATT AACTCCTTGG TTGATTTTGA AGACCCTATC
GATATTTTGG CACATTTGAT GATTGGCTCA GAAGGTACTT TAGGTTTTAT TTCTTCGATT
ACCTATAACA CGGTCATCGA GCATAAATAC CGTGCTTCAT CGATAGTGTT TTTTCCTGAT
ATGCAAACAA CTTGTTCTGC GGTAAGCGCG CTAGCTGATG CAAATGTGTC TGCGGTTGAA
TTGATGGACC GAAGATCGTT AGCCTCAGTA AGTGATATGA AGGGCTTGCC TGAATTTATT
AAAACACTCG ACCAAGATGT TGGCGCATTA CTGATTGAAA CGCGTGCAGC CAATCAACAG
TTATTAACCG AGCAAATAGC TGACTTAGAA AGTCTATTAA GCGACTTTGA ACAAACCAAT
GTCATCAAAT TCACTGATGT TGCGAGTGAG TACTCACAAC TGTGGGCCAT TCGAAAAGGT
ACCTTCCCTG CGGTTGGCGC CGTAAGAGAA ACAGGTACGA CTGTTATCAT TGAAGATGTT
GCTTTTCCTG TTGAACAACT TGCAGATGCG GTTGCCAAAC TACAAGGGCT GTTTGAAAAA
TATCATTACG ATGAAGCCAT TATCTTTGGC CATGCTCTTG ATGGTAATTT ACATTTTGTT
TTCACCCAGG ATTTCTCAAC GCAGTCAGAA GTAGACCGAT ATCAGTCTTT TATGGATGAC
GTTTGCCAGC TAGTGGCAGT CGATTACCAA GGTTCATTGA AAGCTGAACA TGGTACTGGA
CGCAACATGG CGCCATTCAT TGAATTAGAG TGGGGCAAAG AAGGTTTTAG TTTGATGCAG
CAATTAAAAG CCTTATTTGA CCCAAGTTAT TTATTAAACC CCGGCGTTAT CATTAATGAT
GATCCGTTAG CTCACATTAA AAACTTAAAA AACCTACCGG CAGCACATGA CATTGTCGAT
AAATGTATTG AATGTGGCTT TTGTGAGCCG GTCTGTCCTT CAAAAGGGCT GAGTCTAACA
CCAAGACAGC GTATTACCAC CTATCGTGAA ATTAGTCGTT TAACAGCCTC AGGTGATAAC
CCTCAATTGT TAAGTGAACT TGAAAAAGAC TTCAACTATT TAGGTATAGA TACCTGTGCA
GCAACAGGTT TGTGCGCGGA TCGTTGTCCT GTCGGCATTA ATACCGGTGA CCTTATTCGA
GATCTTCGCA ATGTTAGAAA TACTAAGTAC CAAGGAGTAT CGAAAAAGTT AGCGAATAAC
TTTGCCAGCA TAGAAAAAAT GACACGGGTT TCCTTAGCCA TTGCTGGTTT TAGTCAACGC
CTACTAGGTA ATACTGTGAT GGGCGGTTTA ACGGGCACCG TGCGTAAATT GTCAGCGAAT
AGTATTCCAC TATGGAGTAA GTACCTGCCA AATAAAGCTA GTTATCAGCC CAAAACGATC
TCAGACAGCA ATAGTGCTAA ACCCAAGGTT GTTTATATAC CCAGTTGTGC CAGTAGAAGT
ATGGGACAAG CGGTTGATGC AACTGAGCAA CGTTCGTTAA CTGAAGTGAC CTATGCGGTT
TTAGCAAAGG CAGGTTTTGA CATTATTAGT CCTGACTTTA CCGGTGAGTG TTGCGGTATG
CCATTTAATA GTAAAGGTAT GTTTGATGAG GCTGGACAGA AAAGAAGTTC ACTGTTAACA
AAGCTAATTG AGCTGAGTGA AAATGGTAAA TATCCAATTT TAATTGATAC TAGTCCCTGT
AAATCAATGT TACTTGAAAA TACAGCCGCC ACTGCAAATT TATCTATTTA TGAACCAGTA
GGTTTTGTTG CGGATGTATT GGCTGAACAT TTAGCTTTTA AGCAATTAAA CGATACCATC
ATGCTGCATG TCACTTGTAG CAGTAGACGT ATGGGCTTAA CCGATAAAAT GGAGCAACTT
GCTAAGTTAT GCAGCAATAA TGTTGTTATT CCTGAACATA TTCAGTGTTG TGGTTTTGCG
GGAGATAAAG GTTTTACCAC CCCAGAGTTA AATGAAAATG CTTTAGCCAC CTTAAAAGAG
CAAGTACCAT CAGACTGCTC TGTGGGCTAT AGCAATAGCA GAACCTGTGA AATAGGTTTA
TCGCATCATG CAGGGATAGA TTACCAATCC ATTCTTTATT TAGTAGATAA AGCGACTACG
GGTCATAGCG TTTAA
|
|---|
| Protein sequence | MLPEHYQLLA KQVAEFIPAS RIITDYTRRL AYGVDASFYR LVPQLVLILD DEAEVVRVIK
AAAQAKLPVT FRAAGTSLSG QAQSDSILIM LTNSWRDHEI LDLGLKIKLG PGVIGADANK
YLLPYGRKIG PDPASINTCK VAGIAANNAS GMCCGVAQNS YQTLDNIRLV LHDGSILDTA
DEASISAFKT SHTQLLEQLD TLATKTRSDG TLSALIKHKY RLKNTTGYAI NSLVDFEDPI
DILAHLMIGS EGTLGFISSI TYNTVIEHKY RASSIVFFPD MQTTCSAVSA LADANVSAVE
LMDRRSLASV SDMKGLPEFI KTLDQDVGAL LIETRAANQQ LLTEQIADLE SLLSDFEQTN
VIKFTDVASE YSQLWAIRKG TFPAVGAVRE TGTTVIIEDV AFPVEQLADA VAKLQGLFEK
YHYDEAIIFG HALDGNLHFV FTQDFSTQSE VDRYQSFMDD VCQLVAVDYQ GSLKAEHGTG
RNMAPFIELE WGKEGFSLMQ QLKALFDPSY LLNPGVIIND DPLAHIKNLK NLPAAHDIVD
KCIECGFCEP VCPSKGLSLT PRQRITTYRE ISRLTASGDN PQLLSELEKD FNYLGIDTCA
ATGLCADRCP VGINTGDLIR DLRNVRNTKY QGVSKKLANN FASIEKMTRV SLAIAGFSQR
LLGNTVMGGL TGTVRKLSAN SIPLWSKYLP NKASYQPKTI SDSNSAKPKV VYIPSCASRS
MGQAVDATEQ RSLTEVTYAV LAKAGFDIIS PDFTGECCGM PFNSKGMFDE AGQKRSSLLT
KLIELSENGK YPILIDTSPC KSMLLENTAA TANLSIYEPV GFVADVLAEH LAFKQLNDTI
MLHVTCSSRR MGLTDKMEQL AKLCSNNVVI PEHIQCCGFA GDKGFTTPEL NENALATLKE
QVPSDCSVGY SNSRTCEIGL SHHAGIDYQS ILYLVDKATT GHSV
|
|---|
| |