| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4684 |
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| Symbol | |
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| ID | 3518763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4952792 |
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| End bp | 4953592 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637287123 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_271328 |
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| Protein GI | 71278624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTATC TTATTTACTC TGGTGGTGTT GAGAATACAG GACCTTTATG GATATTTATT
GTAGCCCCTG TTTCAGTCTT TATTCATGGT TTAAAGCGCG GCTTGATTGA TATTGCAGTA
TTCGTTTCAA TCATAAGTAC CCTAATGTTT ATGCCAACAG ATATTATTGC TCATGCTAAC
TACAGTACTG AATTTAAATT ACGCTTACTC TATTCTTTTT TAACCGTTAC CTTTCTGTCA
GCTTTGTATG AATATTCAAG AAATAAATCT TATCAACACA CTTTAGAATT AAGTAAAAAA
TACCAACAGC TTGCCCACTT CGATCCCTTA ACTCAACTTT CGAACCGTCG TGATGCACTC
GGTATTTTAA AACAAGAACA AGCGAGAATG ATACGTAGTA AAGAACCATT ATCCATCATC
ATATGCGATG TTGATTATTT TAAAAAAATT AATGATCAAT ATGGTCACAA TGCTGGTGAT
GCAGTGTTGA TAGAACTTGC AAAAATATTT ACCAGCAATA TAAGAGAACA AGATTGTGTC
GCTCGCTGGG GTGGGGAAGA GTTTTTATTT ATTTTGCCGC AGACACTCGC GAGAAATGCC
AATGTTTTTG CTGTAAAAAT TCAAGAAAAA TTGCAAAACC ATTTAGTGGA TTACCAAGGT
AAAGAAATTA AAGTATCGGT CAGTATGGGT ATTGAACAAT TCAATGGCAA TCAAAACATT
GATGAGATAA TCAACAGCGC AGACAAATAC TTATATCAGG CGAAGAATTC AGGAAGAAAT
CAAATATTTC CAAAATTTTA A
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| Protein sequence | MFYLIYSGGV ENTGPLWIFI VAPVSVFIHG LKRGLIDIAV FVSIISTLMF MPTDIIAHAN
YSTEFKLRLL YSFLTVTFLS ALYEYSRNKS YQHTLELSKK YQQLAHFDPL TQLSNRRDAL
GILKQEQARM IRSKEPLSII ICDVDYFKKI NDQYGHNAGD AVLIELAKIF TSNIREQDCV
ARWGGEEFLF ILPQTLARNA NVFAVKIQEK LQNHLVDYQG KEIKVSVSMG IEQFNGNQNI
DEIINSADKY LYQAKNSGRN QIFPKF
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