| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4667 |
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| Symbol | gcdH |
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| ID | 3520413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4932604 |
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| End bp | 4933788 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287106 |
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| Product | glutaryl-CoA dehydrogenase |
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| Protein accession | YP_271311 |
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| Protein GI | 71279950 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAATT CAGTACTAAA CAATTGGGAT GACATACTTC TACTTAACGA CCAATTATCA
GAAGATGAAC GAATGGTGCG TGATATGGCA CATACCTTTT GCCAAGAAGA GTTAATGCCT
GGTGTATTAA TGGCTAACCG TAATGAGGAC TTTGATCCAA ATATCATGCG TCAGTTTGGT
GAGCTTGGGT TATTAGGTGC AACCATTGAT GGTTATGGTT GTTCAGGTGT TAATTACGTA
AGTTATGGCT TAGTCGCCCG TGAAGTAGAA CGAGTAGACA GTGGTTATAG AAGTGCAATG
AGCGTGCAAT CCTCATTAGT TATGCATCCA ATTAATGCGT ACGGTACTAC TGAACAAAAA
GAAAAATATT TACCTAAGCT TGCTACGGGT GAATACATAG GTTGTTTTGG TTTAACCGAG
CCAGGTTCAG GTTCTGATCC TTCAAGTATG ATCACTCGCG CTAAGAAAGT AGATGGCGGT
TATCGTTTAA CGGGCTCAAA AATGTGGATT ACCAATTCAC CTATCGCCGA TGTTTTTGTA
GTGTGGGCAA AAAATGAAGC TGAAGGAAAT CAAATTTGTG GTTTTGTGCT AGAAAAAGGC
ATGGCAGGTT TATCAGCGCC AAAAATTGAA GGTAAAATAT CTTTACGTAC CTCAATTACG
GGTGAAATCG TAATGGATAA CGTTTTTGTG CCAGAAGAAA ATATGTTTCC TGAAATACGC
GGTTTAGCTG GACCATTTGG TTGTTTAAAT ATGGCGAGAT ATGGTATTTC TTGGGGGGCA
TTGGGCGCTG CTGAGTTCTG TTGGCATGGT GCACGTCAGT ACGGTTTAGA TCGTATTCAA
TTTAAACGTC CGCTGGCACA AACACAGTTA TTCCAAACTA AACTCGCTAA TATGCAAACC
GAAATCTCGT TAGGTTTACA GGCATCACTA CGTGTTGGTC GTATTATTGA TACCAAAAAG
TGGGACCCAA CCATGATATC AATGGTTAAA CGTAACAACT GTGGTAAATC ACTTGATATT
GCTCGTATGG CGCGTGATAT GCACGGCGGC AACGGTATTT CAGATGAGTT TCATGTTATT
CGTCATATGG TTAACTTAGA AACGGTAAAT ACCTATGAAG GGACGTATGA TGTACATGGT
TTAATACTCG GTCGTGCTCA AACGGGTTTA CAAGCATTTT ACTAA
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| Protein sequence | MTNSVLNNWD DILLLNDQLS EDERMVRDMA HTFCQEELMP GVLMANRNED FDPNIMRQFG
ELGLLGATID GYGCSGVNYV SYGLVAREVE RVDSGYRSAM SVQSSLVMHP INAYGTTEQK
EKYLPKLATG EYIGCFGLTE PGSGSDPSSM ITRAKKVDGG YRLTGSKMWI TNSPIADVFV
VWAKNEAEGN QICGFVLEKG MAGLSAPKIE GKISLRTSIT GEIVMDNVFV PEENMFPEIR
GLAGPFGCLN MARYGISWGA LGAAEFCWHG ARQYGLDRIQ FKRPLAQTQL FQTKLANMQT
EISLGLQASL RVGRIIDTKK WDPTMISMVK RNNCGKSLDI ARMARDMHGG NGISDEFHVI
RHMVNLETVN TYEGTYDVHG LILGRAQTGL QAFY
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