| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4665 |
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| Symbol | gabD2 |
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| ID | 3521963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4929982 |
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| End bp | 4931466 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637287104 |
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| Product | succinate-semialdehyde dehydrogenase |
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| Protein accession | YP_271309 |
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| Protein GI | 71281491 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAG TTACTTGTAA TTTAGAAGCC GCGGGCATAA AAGACAGCCA GCTTATCAAA
CCATTTTCAT ATATTAACGG CAGTTGGCAT AGTAGTGAAA CACAATTCCC AGTAATCAAC
CCATCGACTG GGGAAGTTGT TGCTCAAGTG AGTAATGCTG ATGTAGCCGA AACTGAATTG
GCGGTGTCTG CTGCCAAAGG TGCATTAAAA ATGTGGTCAG CTAAATCGGC CAACGAACGT
GCAACTCTGT TACGTAACTG GTTTAATTTA GTAATGGAAA ATCAAGATGA CCTAGGACGT
ATCCTAACGT TAGAGCAAGG TAAACCTCTA GCTGAAGCTA AAGGTGAAAT TGCCTACGGT
GCGGCATTTT TAGAATGGTT TGCTGAAGAA GGTAAACGCG TTTACGGCGA TACCATCCCT
GCGCTTTCGA GTGATAAAAA AATTGTTGTT ATTAAGCAGC CCGTTGGCGT AGTTGCTTCT
ATTACCCCAT GGAACTTCCC AAATGCGATG ATCGCCCGTA AAGCGGCGGC GGCGTTAGCT
GCAGGTTGTA CTTTTGTGGT TAGACCGTCT GAATCTACAC CGTTGTCGGC ATTAGCAATG
GCTGAATTAG CAGAGCGAGC AGGTATTCCT GCTGGCGTAT TTAACGTTGT TGTTGGTAGT
AACTCTCGCG GCATGGGGCA AGTATTAACA CAACATCCTG ATGTTGCAAA ATTCACTTTC
ACCGGTTCGA CTGGCGTTGG CAAATTATTA TTAACTCAAT GTGCAACAAC CGTGAAAAAA
GTATCAATGG AATTAGGTGG TAATGCACCC TTTATTGTTT TTAACGATGC CGATATTGAT
GCTGCGGTAC AAGGTGCGAT TATTTCTAAA TACCGTAATG CAGGTCAAAC GTGTGTTTGT
ACCAATCGTA TTCTTGTACA ACAAGGCGTA TTAGAAGAAT TTACCGAAAA ATTCAAAAAT
GCAGTAGCTG AATTGCACAT TGGTGATGGT TTAGTCGAGG GCGTTAACCT TGGCCCAATG
ATTTCAGATA AAGCGGTTTG TGATGTTGAA AAACTGGTTG CTGACTCTAT TGCGGCAGGT
GCAAAAGTTG CCTTTGGCGG ACAGCGTTCA GAAGCAGGTG AACTGTTCTA TCAGCCAACA
ATCCTAACTG GCGTGACCAA TGATATGCCC ATTGCAGCCA ATGAAATTTT TGGTCCAGTT
TCACCTATTA TTGCTTTTGA AACTGAAGAA GAAGCGATTG AACTTGCCAA CGATACAGAA
TACGGCTTAG CGGCGTATTT CTATTCTCGC GACATTGGAA CGGTTTGGCG AGTAGCTGAA
GGGCTTGAGT TTGGCATGGT AGGTATTAAT GAAGGCATTA TTTCTAACGC TGCTGCTCCA
TTTGGTGGTG TTAAACAATC AGGTAACGGC CGCGAAGGTT CAAAATACGG CTTAGACGAT
TACTTAGAAA TTAAATACCT ATGTATGGGC GGTTTAGATA AATAG
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| Protein sequence | MTEVTCNLEA AGIKDSQLIK PFSYINGSWH SSETQFPVIN PSTGEVVAQV SNADVAETEL
AVSAAKGALK MWSAKSANER ATLLRNWFNL VMENQDDLGR ILTLEQGKPL AEAKGEIAYG
AAFLEWFAEE GKRVYGDTIP ALSSDKKIVV IKQPVGVVAS ITPWNFPNAM IARKAAAALA
AGCTFVVRPS ESTPLSALAM AELAERAGIP AGVFNVVVGS NSRGMGQVLT QHPDVAKFTF
TGSTGVGKLL LTQCATTVKK VSMELGGNAP FIVFNDADID AAVQGAIISK YRNAGQTCVC
TNRILVQQGV LEEFTEKFKN AVAELHIGDG LVEGVNLGPM ISDKAVCDVE KLVADSIAAG
AKVAFGGQRS EAGELFYQPT ILTGVTNDMP IAANEIFGPV SPIIAFETEE EAIELANDTE
YGLAAYFYSR DIGTVWRVAE GLEFGMVGIN EGIISNAAAP FGGVKQSGNG REGSKYGLDD
YLEIKYLCMG GLDK
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