| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4664 |
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| Symbol | gabT |
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| ID | 3521355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4928598 |
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| End bp | 4929884 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287103 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_271308 |
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| Protein GI | 71280886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACAT CAAATCAAGA ATTACAAAAC AGAAAGACTA AAGTGATCGC TCGTGGCCAA
GGCAATATGT ATCCAGTGTA TGTAGAGCGT GCAGAAAACT CAGAAATATG GGATGTAGAA
GGTAATCGCT ATATCGACTT TGGTGCGGGT ATTGCGGTGT GTAATACCGG TCATAGTCAC
CCAAAAGTTG TCGCTGCTGC AAAAGCACAG TTAGATAAAT TTAGTCATAC TTGTGTCATG
GTTAACCCTT ATGAAGTTGC TGTTGAATTA GCAGAAAAAC TAATCGATAT CGCCCCTGGT
GATTCTGAGA AAAAAGCGAT ATTTGTTTCA ACAGGTGCTG AAGCCGTTGA GAACTGTGTG
AAAATTGCTC GTGCCCATAC TGGTCGTCGT GGTGTTATTG CCTTTAATGG TGGTTTTCAC
GGACGTACCA ACTTAACCAT GGCGCTAACA GGTAAAATCA CACCTTATAA AAACTTATTT
GGCCCATTTC CTGGTGATAT TTTTCATGCC CCATTCCCAA TCGAATGCCA TGACATTACG
GTTAAGCAAT CGTTAAAAGC CCTAGAGAAT TTATTTAAAG TCGATATCGC ACCTAGCGAT
GTTGCAGCCA TTATTGTTGA ACCTGTACAA GGTGAGGGCG GTTTTTATGC GGCACCTACT
GAATTTTTGC AAGCCTTACG TCAACTCTGT GATCAGCATG GAATTATGTT AATTGCTGAT
GAGATCCAAA CGGGCTTTGG CCGTACCGGT AAAATGTTTG CTTTTGAACA TTCAGGGGTT
GAAGCAGATT TAATGACCAT GGCAAAAGGC ATTGCGGGTG GTTTCCCAAT CGCAGCCGTT
GTGGGTAAAA GTGAAGTGAT GGATGCACCA TTGCCAGGTG GTTTAGGCGG AACTTATGGT
GGTTCTCCTG TCGCTTGTGC TGCAGCTTTA GCGGTTTTAG ATATTATCGA AGAAGAAAGT
TTAGTTGAGC GTTCAGCACA CATTGGTGAA CAATTTAACC ACCGTTTAAG CCAGTTAAAA
ACGGCATTCC CTGAACTAGT TTTAGAAGTA CGTAATCAAG GTTCAATGAT TGCCATGGAA
TTAATCCAAA ACGGTGATGC AGAGCAACCA AATACTGAAT TAACCCAAGC GATTATCGCT
CATGCGGCTA AAAATGGTTT GGTATTGCTT GCGTGTGGTT TTTACGGAAA TGTTATCCGT
TTCTTACCAC CACTAACCAT CACAGATGAA GTATTAACAG AAGGCTTAGA TGCGTTCGAA
AACATGTTCA AAGAGCTTGC TAAGTAG
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| Protein sequence | MTTSNQELQN RKTKVIARGQ GNMYPVYVER AENSEIWDVE GNRYIDFGAG IAVCNTGHSH
PKVVAAAKAQ LDKFSHTCVM VNPYEVAVEL AEKLIDIAPG DSEKKAIFVS TGAEAVENCV
KIARAHTGRR GVIAFNGGFH GRTNLTMALT GKITPYKNLF GPFPGDIFHA PFPIECHDIT
VKQSLKALEN LFKVDIAPSD VAAIIVEPVQ GEGGFYAAPT EFLQALRQLC DQHGIMLIAD
EIQTGFGRTG KMFAFEHSGV EADLMTMAKG IAGGFPIAAV VGKSEVMDAP LPGGLGGTYG
GSPVACAAAL AVLDIIEEES LVERSAHIGE QFNHRLSQLK TAFPELVLEV RNQGSMIAME
LIQNGDAEQP NTELTQAIIA HAAKNGLVLL ACGFYGNVIR FLPPLTITDE VLTEGLDAFE
NMFKELAK
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