Gene CPS_4653 details

Gene Information

• Locus tag: CPS_4653
• ID: 3521179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4914299
• End bp: 4914778
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637287092
• Product: YbaK/prolyl-tRNA synthetase domain-containing protein
• Protein accession: YP_271297
• Protein GI: 71280710
• COG category: [S] Function unknown
• COG ID: [COG2606] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.321898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATTT CTACCCGACT CGACTCCTAC TTAACCGCAC AGAATATATC TTTTCAGGCC 
ATTGAACATG ACCACAGTGC AAGCTCTTTT GATAGTGCTA TTACGGCGAA GATTCCCCTG 
AACCAAATAG CCAAAGCTGT CATTTTAAAA GACCATGAAG ATAGAAAATT AATGGCAGTA 
TTACCTGCTA AAAATAAAAT AAGCTTATCT GTAATTAATG ATGAGCTATT CGGCAGTTAC 
AAGTTACTTA AAGAAAAAGA AGTCTATCGC ATGTTTAGTG ACTGTGAGCA TGGGGCTATT 
CCGCCCGTAG GTGAGGCTTT CAATATGCAA ATGATATGCG ACGAGCTATT AGACCAATTA 
GATTATGTTT ATATTGAAGC TGGTGATCAT CGAAAGTTAT TACGTATTAA CAATGAAGAT 
TTTAAAATCA TGACTGCAAA TAGTAAACAT TTGCGTTTTA GTAATGAAGT TTTTCATTAA 

 

Protein sequence

MTISTRLDSY LTAQNISFQA IEHDHSASSF DSAITAKIPL NQIAKAVILK DHEDRKLMAV 
LPAKNKISLS VINDELFGSY KLLKEKEVYR MFSDCEHGAI PPVGEAFNMQ MICDELLDQL 
DYVYIEAGDH RKLLRINNED FKIMTANSKH LRFSNEVFH