Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4643 |
Symbol | |
ID | 3518495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4902354 |
End bp | 4902896 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637287082 |
Product | hypothetical protein |
Protein accession | YP_271290 |
Protein GI | 71278745 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.104755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATTGG ATAAAATTTC GACTCAGTTA GGTGGAACTC ACACAAAAAT GCCACCAGTG GAATCTTGGA ATCCTCCGTA TTGTGGAGAG ATTGATATAC AGATAAAAGC CAATGGTGAT TGGTTTTATC AAGGCGGTAT TTTTAAAAGA CTACCTTTAG TAAAATTATT TGCGTCTGTG TTGATTAAAG AAGTTAATAA AAATGTTGAT GAATACTTCT TAGTAACACC GGTGGAGAAA GTGAAAATAA AAGTTGATGA TGCCCCTTTT GTAATTACGC AGTGGCATTG GACTGATGAA AACAACAACA TTATGAAGGT TAGTACTAAC TTGGATGACG AGTTTATTCT TAATGCAGAA CATCCGTTAA TTGTTACTGA AAATGGTGAT TTGTATGTCA CTGTTCGCAG GGATTTACAG GCGAAAGTGC ATAGAAATGT TTATTACCAG TGGGCAGACA TAACGCAAGA GATGGTGACT GAAAATGGCA CTGAGTTGAT TCTCTCAAGT GCCGACTGTC AATTTAGCTT AGGTAAACTG TAA
|
Protein sequence | MSLDKISTQL GGTHTKMPPV ESWNPPYCGE IDIQIKANGD WFYQGGIFKR LPLVKLFASV LIKEVNKNVD EYFLVTPVEK VKIKVDDAPF VITQWHWTDE NNNIMKVSTN LDDEFILNAE HPLIVTENGD LYVTVRRDLQ AKVHRNVYYQ WADITQEMVT ENGTELILSS ADCQFSLGKL
|
| |