| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4642 |
|---|
| Symbol | thiF |
|---|
| ID | 3520748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4901592 |
|---|
| End bp | 4902341 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637287081 |
|---|
| Product | adenylyltransferase ThiF |
|---|
| Protein accession | YP_271289 |
|---|
| Protein GI | 71280283 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.144035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAAGTA ATCAAGAGCA ACTCAAATAC TCCCGTCAAA TCATACTCGA TAAAATTGGT
AACCAAGGAC AAATCGCGCT GCGTAACGCT AAAGTACTCA TCTTAGGCGT GGGCGGTTTA
GGTAACCCTG CGAGCTTATA CTTAGCTGCT GCTGGCGTTG GTACACTCTA TATCGCTGAT
GGTGACTATA TAGAGCTCAG TAATTTACCC AGACAAATTC TCTTTAGTGA AGACAATATT
AATGAAAATA AAGCTGATGT GGCCGCTGAA AAATTACAAC AGCAATTTCC CGATGTGACT
ATTGAAGCGA TAGATGAAAT GTTCGATGAA GAGTTAAGTG ATTATTATCT TCCACAAGTC
GACTTAGTGC TCGATTGCTC TGATAATATC CAAACTCGCT ACTTAATTAA TCAAGCATGC
GTACAACATA AAGTGCCACT GATAGTGGGA GCCGCTACTG GCTTTGATGG TCAACAATTG
ACTATAGACC CTCGCGATGA AACCAGTGCT TGTTATCATT GCCTCTTTCC TGCTAGTGAG
AAAGCACCCA CTGATAACTG TCAAACCATT GGCATTATAG GCCCCGTACT CGCCATGATT
GCCGGTATGC AAAGCTTGCA AGCGATTAAG CTATTAACGG GTAATAAAGT ACAACTCAAT
CAGCTTAACT TACTTGATGG TTTAGCGAAT CAATGGCAAC AATTTACAAT GAAAAAACAA
AAGAGCTGCA CAGTTTGTGG TTCAAATTAA
|
|---|
| Protein sequence | MLSNQEQLKY SRQIILDKIG NQGQIALRNA KVLILGVGGL GNPASLYLAA AGVGTLYIAD
GDYIELSNLP RQILFSEDNI NENKADVAAE KLQQQFPDVT IEAIDEMFDE ELSDYYLPQV
DLVLDCSDNI QTRYLINQAC VQHKVPLIVG AATGFDGQQL TIDPRDETSA CYHCLFPASE
KAPTDNCQTI GIIGPVLAMI AGMQSLQAIK LLTGNKVQLN QLNLLDGLAN QWQQFTMKKQ
KSCTVCGSN
|
|---|
| |