| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4625 |
|---|
| Symbol | |
|---|
| ID | 3520050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4887135 |
|---|
| End bp | 4887581 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637287064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_271272 |
|---|
| Protein GI | 71279591 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1981] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00701] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT TTTTAATCAA CAATATCCTC TGGCTTAAAG CATTTCATGT CATTTTCATG
GTGGCTTGGT TTGCTGGTAT ATTTTATTTG CCACGCTTAT TTGTTAACCA TGCCGAAACC
AAGTCTGATG AAATAGCGCA ACAACTTAAA GGTATGGAAA AACGTTTACT CTATTTTGTT
ACCCCTTTTG CCATCTTCAC CCTGTTGCTC GGTGTAGCAA TAATATATGC CTATGGCTAT
GACTGGTTTG TTGCCGCAAA ATGGCTACAT ATCAAATTAA GTTTAGTCAT AGTGCTCTTT
GCTTATCATG GGTATTGTTT TAAGTTAGTT ACCACCTTTG CGCAAGATAA AAACATCCGC
TCAGGGCGCT TCTATCGAAT TTTCAATGAG ATCCCCGTGC TGATTTTGTT TGCTGTTATT
ATCTTAGCTT ACGTTAAGCC AATGTAA
|
|---|
| Protein sequence | MSTFLINNIL WLKAFHVIFM VAWFAGIFYL PRLFVNHAET KSDEIAQQLK GMEKRLLYFV
TPFAIFTLLL GVAIIYAYGY DWFVAAKWLH IKLSLVIVLF AYHGYCFKLV TTFAQDKNIR
SGRFYRIFNE IPVLILFAVI ILAYVKPM
|
|---|
| |