| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4620 |
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| Symbol | |
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| ID | 3521942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4879489 |
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| End bp | 4882647 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287059 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_271267 |
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| Protein GI | 71281470 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACGC TTATTGAAGC CGCATTGACA CGTACTCGCT CTGTTTTGAT GCTATTTGTA
CTACTACTTA TTTCTGGCGC AGTGACTTAC AACAACATTG CTAAAGAAGC CAATCCTGAT
ATTACCATTC CAATTATTTA TGTTTCTATG ATTCATGATG GTATTTCTCC TGAAGATGCT
GAGCGCATGC TCGTAAGACC GATGGAAAAT GAGCTTAAAT CTATCGCGGG CATTAAAGAA
ATGCGTTCCA ATGCAGGAGA GGGGCACGCC TCTGTTACGT TAGAATTTAT TGCCGGACTT
GACCCTAAAG AAGCACTTGC CGATGTGCGT GATAAAGTGA CTTTAGCCAA AGCTAAATTG
CCCAATGAGA CTGAAGAGCC GGTGGTAAAT GAAGTCACCA TGGCTAACCA AGAAGCAGCA
TTGACGGTTG TGTTATCTGG GGCTGTTACT GAGCGAGGTT TGATAACAAT AGCGCGGAAC
GTCAAAGACA AAATCGAAGG CATGCAAGAA GTGCTAGAAG TTGAAATTGG TGGTGACCGT
GAAGATATGG TTGAAATCAT TGTCGATCCG TTATTAATGG AAAGCTATGG GCTTGATCAA
ACGGACATTT ATAACCTTGT TGAGCGTAAC AATCGCTTAG TACCAGCAGG GACTATGGAT
ACTGGCAAAG GACGTTTTGC CATCAAAGTG CCTTCTGTTT TTGAAAATAT TCAAGACTTA
CTTGAACTGC CTATTAAGGT CGATGGCGAT CGAGTTATTA CCTTTCAAGA TGTATCAACG
GTGCGTCGTG CTTATAAAGA TCCTACTGGT TTTGCTCGAT TAAACGGTCA TCGCTCGGTA
TCAATAGAAG TCAAAAAACG CTCTGGTGAG AACCTGATTG AAACGGTTGA TAAAGTTAAA
GAAATTGTCA ATGAAAGCCG TTTAAAATGG CCACAACAAG TCAAAGTGGA TTATGTTGGT
GATCAATCTA TAGAAATTAA AAATACGCTC ACAGACTTGC AGAATAATGT TTTTTCAGCG
GTATTATTGG TCGTTATTGT CATTATTGCT GCTTTAGGTG GCCGCACCGC TTTATTGGTA
GGTTTAGCAA TTCCAGGCGC CTTTTTAACA GGAATATTAG TCATTGCTTT AGCAGGGATG
ACGGTAAATA TAGTGGTGCT ATTTGGCCTA ATCATGGCAG TAGGCATGCT TGTTGATGGG
GCGATCGTTG TCACCGAGTT TGCAGACAGG CAGATGAATG AAGGTCATAG CAAAGCTGTT
GCTTATGGTA CTGCTGCTCG TCGTATGGCA TGGCCGATTA TTGCTTCAAC GGCGACAACA
TTAGCAGCCT TTGCGCCCTT GATGTTTTGG CCAGGTATTA TGGGTGAGTT TATGAAGTAC
TTACCTTTTA CCCTCATCGC GGTGTTATCA GCCTCCTTAG CAATGGCACT CATTTTTGTG
CCCACTTTAG GCGCTGTTTT AGGTAAAGCT CGCGTTGTTA GCAGTAAAGA ACAACAACAA
ATAGAGCATG CTGAAGCGGG AGAATTCAAT AAATTATCGG GTTTTACCGG TCGATACATA
CGTGTACTGA CAACAGCAAT TAGACATCCT TGGAAAATAG TTGCTGGTAC CTTTGCGATA
TCTTTTGTGG TGATGTGGCT CTATGGCGCA TCTGGTCTTG GCGTGAGCTT CTTTCCTGAG
GTTGAGCCTC AAAGTGCAAC TATGGTGGTG CGCTCTCATG GCGATTTATC AGTAAAAGAA
AAAGACGTGA TTATGCGTTC TATAGAAGCA CGTATCTTAC CGCTCGAGGA AATTGAAACC
TTATATACTC GAACGGGTGG CAATAACCAA ATCGGCACTT TTAAACTAAA TTTTGTTGAT
TGGCAGGTAA GACGTTCAGC GGATGAAATA GTGGCCAATA TTCACGAGTT AACGGATGAC
TTAGCCGGCG TTGAAATTGA AGTGAGAAAA AATGAAAACG GCCCGCAAAG TGGTAAGGAT
CTTAAACTTG AATTGAGCTC GCGTTTTCCT GGAGAACTGG ATAAGTCGGT GAAAATTATA
CGTGATGCAT TGGAAACATC CGGTAAATTT ACTGACATAG AAGATACGGG TGCTAAACCA
GGCATAGAAT GGCAGCTCAT TATTGATCGT AATAAAGCGG CTACCTATGG CGCTGATGCT
GCGTTAGTTG GCTCAAGTGT GCAAATGGTT ACTAACGGTT TAAAACTTGG TGAATATCGC
CCTGACGATG TTGATGATGA ACTGGATATT CGAGTTCGTT TTCCGGAAGA CAAACGTAAT
ATAAGTCGAC TAGATTCACT CCGTTTAAAA ACAACGTCAG GTTTAGTGCC CGTTGGCAGT
TTTGTCGAGC GTAGAGCCGC ACCTAAAGTT GATACAATTC GTCGTGTTGA TGCTAAGCGA
GTTGTCACTG TGCAGGCGAA CTTAATTGCC GGTGCTCAGT TACTGAATGA GTTACCTATT
TTGCAAGAAC AGTTACCGAC ACTTGGCTTG CACCCGTCAG TGGATATTGA TGTTAAGGGA
CAGAATGAGG ATCAACAAGA GTCACAAGCG TTTTTAGTGA ATGCTTTTGC TATCGCACTC
TTTGTAATGG CCATGATTTT AGTGACTCAA TTCAATAGCT TTTATCAAGC ATTATTGATT
TTAAGTGCCG TCATATTCTC AACCGTTGGC GTATTTTTAG CACTATTATT AGTTCAAAAA
CCGTTTGGCA TAGTTATGGG CGGCATTGGT GTTATCTCAT TGGCGGGTAT TGTTGTAAAT
AATAATATAG TACTGATTGA TACCTACAAT GTTTTACGTA AAGAAGGTTA CCCTGTGGTT
GAGGCCGTTT TAAGAACAGG CGCGCAGCGT TTACGGCCGG TTATGTTAAC CACTATAACC
ACCATTTTGG GTTTATTGCC TATGGTCTTA CAGGTAAACT TAGATTTCTT TGAGCGTACT
ATTGTCTTTG GTGCACCGTC AACACAGTGG TGGACACAGC TAGCAACGGC TATTGCTGGC
GGCTTAGCTT TTGCTACGGT ATTAACCTTA GTATTAACAC CCTGTCTATT GGTCTTAAGA
GATAAGCGTA AAGAAGATAA ACAGGCAAAG GCAACAATCA TTCTGCAAAA AGAAGCGAAT
CAAGTTAAGC AAGTTAAAGA AGTGAGTAGC GCAGCTTAG
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| Protein sequence | MLTLIEAALT RTRSVLMLFV LLLISGAVTY NNIAKEANPD ITIPIIYVSM IHDGISPEDA
ERMLVRPMEN ELKSIAGIKE MRSNAGEGHA SVTLEFIAGL DPKEALADVR DKVTLAKAKL
PNETEEPVVN EVTMANQEAA LTVVLSGAVT ERGLITIARN VKDKIEGMQE VLEVEIGGDR
EDMVEIIVDP LLMESYGLDQ TDIYNLVERN NRLVPAGTMD TGKGRFAIKV PSVFENIQDL
LELPIKVDGD RVITFQDVST VRRAYKDPTG FARLNGHRSV SIEVKKRSGE NLIETVDKVK
EIVNESRLKW PQQVKVDYVG DQSIEIKNTL TDLQNNVFSA VLLVVIVIIA ALGGRTALLV
GLAIPGAFLT GILVIALAGM TVNIVVLFGL IMAVGMLVDG AIVVTEFADR QMNEGHSKAV
AYGTAARRMA WPIIASTATT LAAFAPLMFW PGIMGEFMKY LPFTLIAVLS ASLAMALIFV
PTLGAVLGKA RVVSSKEQQQ IEHAEAGEFN KLSGFTGRYI RVLTTAIRHP WKIVAGTFAI
SFVVMWLYGA SGLGVSFFPE VEPQSATMVV RSHGDLSVKE KDVIMRSIEA RILPLEEIET
LYTRTGGNNQ IGTFKLNFVD WQVRRSADEI VANIHELTDD LAGVEIEVRK NENGPQSGKD
LKLELSSRFP GELDKSVKII RDALETSGKF TDIEDTGAKP GIEWQLIIDR NKAATYGADA
ALVGSSVQMV TNGLKLGEYR PDDVDDELDI RVRFPEDKRN ISRLDSLRLK TTSGLVPVGS
FVERRAAPKV DTIRRVDAKR VVTVQANLIA GAQLLNELPI LQEQLPTLGL HPSVDIDVKG
QNEDQQESQA FLVNAFAIAL FVMAMILVTQ FNSFYQALLI LSAVIFSTVG VFLALLLVQK
PFGIVMGGIG VISLAGIVVN NNIVLIDTYN VLRKEGYPVV EAVLRTGAQR LRPVMLTTIT
TILGLLPMVL QVNLDFFERT IVFGAPSTQW WTQLATAIAG GLAFATVLTL VLTPCLLVLR
DKRKEDKQAK ATIILQKEAN QVKQVKEVSS AA
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