Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4615 |
Symbol | |
ID | 3522030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4872611 |
End bp | 4873900 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637287054 |
Product | hypothetical protein |
Protein accession | YP_271262 |
Protein GI | 71281558 |
COG category | [S] Function unknown |
COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATATATCAC TATAGTTTTA ATCCTAGCTA GTTTGCTAAT TGCGCCAAAA TTTATTGGCG CTATGGTTGA AACAGAACGT CAACGAGTAC TTGTAAAACT TAATGAAACG GATGGTATCA CCTTAACAAC CAGCCAATAT AGCGGTGGTT GGTTCGGTGC TGATGTCGTC TCAGAAATGA AAATAGCCTT GGAAGATAAT AACCTCAATG AGGTGACTAT TACCGTAGAA GAAGACATCT CTTTTGGTCC TGTCATAATT ACGGATAAAA ATTGGTATTT TGGTTTAGGC TATTCAACGG CGAAATTTAA GTTTGCAGCG CTTGGGGTAG ATGAACGTAT AGTTGATATT ATTAACGAAA AGCTGCATGT CGGTGCACTA CTGGGCTTTA GTAAAGATGT TACCACCTTC ATTAATACTG ATAAAATAAG TTATCAAGAT ACTGATAGCG TGATTGTATC TGAGCCATCT TTTGCCCAAT TTACCTTAAT TAATAATGAA CACATCATTG GTGATTTTTC TTGGGGAGGT CTCGATGTTA AAGGACAGGA TGAACGCCTT GTTATTGGTG ACGTTGGTAT GTCGACTAAG CAAAAAGTTG TTAGCGGTGA TTATCTTGCG GGAACGGCCA TCTTAACTGG TGATGCCATC TTTACCGTTA CAGGGATTAG TGTTTATAAC GATAACAGTA AAGTTTTTTC TTTAGATGGA GCAACCTTAA CGAGCGAGGT TTCATTAGAT AATGATTTAT TAGCGCTTGC GTTGAACTAT CAAGCCAAAG AAATTAGTGC TTCAGGACAA TATTTTAAAG AGCCCAACGT AGCGGTACTG TTAGCTAATA TTGATGTCCA TGCTTTGCAA GAATTAAACA CGGCTATGGC AAATTTGTCG GTTAATGCTT CAGGTGAATA TGACACTGAA GAAAGCCTAA AAGTGCTATC AGCAGTAGCA GAAAAAATAC TCGCTAAAGA TCCTAACTTG AAAATAACAG ATTTAAGTGT TGTTACCGAA GAAGGTAAAG TGGCAACTGA ATTTAACTTC AACATCAACA AAGATTTATT TGATAGTGCT AATTTGAATT CAATGGCCTT AATTAAGGCT TTAGAAGCCG ATGCTAAAGG TAAAGCACCT ATGGCATTCC TAAGTAAATT AGGTATGGCT CCTATGGTGG ATAATTTTGT AGAACAAGGT TATTTGAACC GCCACAATAA CGAAATAACG GTTGAAGCCA AATATGTCCA AAGTCAACTA ACGGTTAATG GAAAAGCCTT TCAGTTATAG
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Protein sequence | MKKIYITIVL ILASLLIAPK FIGAMVETER QRVLVKLNET DGITLTTSQY SGGWFGADVV SEMKIALEDN NLNEVTITVE EDISFGPVII TDKNWYFGLG YSTAKFKFAA LGVDERIVDI INEKLHVGAL LGFSKDVTTF INTDKISYQD TDSVIVSEPS FAQFTLINNE HIIGDFSWGG LDVKGQDERL VIGDVGMSTK QKVVSGDYLA GTAILTGDAI FTVTGISVYN DNSKVFSLDG ATLTSEVSLD NDLLALALNY QAKEISASGQ YFKEPNVAVL LANIDVHALQ ELNTAMANLS VNASGEYDTE ESLKVLSAVA EKILAKDPNL KITDLSVVTE EGKVATEFNF NINKDLFDSA NLNSMALIKA LEADAKGKAP MAFLSKLGMA PMVDNFVEQG YLNRHNNEIT VEAKYVQSQL TVNGKAFQL
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