| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4592 |
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| Symbol | gspC |
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| ID | 3522325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4846614 |
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| End bp | 4847564 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637287031 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_271239 |
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| Protein GI | 71281853 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTC CCACTAACAT GACAGCGTTT GCATCATTAT TCACCCAGCT AGGTCATCGA
CGAGTTGCGC AATCAGTGAT GGTATTATTA GTCGTTTATA TTGCTTATGT ATGCGCAAAC
ATCACTTGGT CACTTGTATC ACAAACACAA TCGAGTCAAA ACACTTCTGT GAATGGCAAC
ACAAAAAGCG TCAATTCTAA TAAAGTAAAG AAGGCAATTG ATGTTGCTAA AATTCAATCG
CTTAATCTGT TCGGTCAATA TAATGAGAAT AGTGATCAAG CAACTGAAAT CGAAATGGCG
AATGTGCCAG AAACCCAATT AAATTTAACA CTGACTGGTC TGGTCGCAAG TGATGAAAAA
TCTATTGCTG CAGCGATCAT TGAAAACCAA GGTAAGCAAG ATACCTATGG TATTGGCGAT
ATCATCATTG GTACACGCGC TAATCTTGAA CAAGTATTAA TAGATCGAGT GATAATTAAG
CACTCAGGTC GGCTAGAAAC TTTGATGCTT GATGGTTTTG ATTATGGTCA GCCAGCAAGA
GAGTTTGCTA ACAAAGCAAC CTCAAGAAAA ACTCGGTCCA CAGTGGGACC TAAATCTTCA
GATTTGGGTG TTGTTGATCA AAGAGACAAT AAAGCATTAA CCGCAACAGC GACAAACCTA
CGATCTGAAT TTTCTAAAGA TCCGACAAAA ATAGGCGACT ATTTACGAAT CTCACCGAAA
CGTAAAGACG GAAATATAAT AGGTTACACC CTTCGACCAG GTAAAAAACC TGAGTTTTTC
AAACTTGCCG GCTTAAAAAC TGGTGATGTC GCCGTTCAGA TGAATGGTTT TGATTTAATT
GCTCCGACAC AGGCAATGCA AGCGATGGCA GAAATGAAAA AAGCACGTGA TATTTCATTA
CTGGTTGATC GCCAAGGTAG TTTGACTGAA ATACTTATTA GTTTAGATTA A
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| Protein sequence | MAFPTNMTAF ASLFTQLGHR RVAQSVMVLL VVYIAYVCAN ITWSLVSQTQ SSQNTSVNGN
TKSVNSNKVK KAIDVAKIQS LNLFGQYNEN SDQATEIEMA NVPETQLNLT LTGLVASDEK
SIAAAIIENQ GKQDTYGIGD IIIGTRANLE QVLIDRVIIK HSGRLETLML DGFDYGQPAR
EFANKATSRK TRSTVGPKSS DLGVVDQRDN KALTATATNL RSEFSKDPTK IGDYLRISPK
RKDGNIIGYT LRPGKKPEFF KLAGLKTGDV AVQMNGFDLI APTQAMQAMA EMKKARDISL
LVDRQGSLTE ILISLD
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