Gene CPS_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4586 
SymbolgspI 
ID3519277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp4839967 
End bp4840350 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content41% 
IMG OID637287025 
Productgeneral secretion pathway protein I 
Protein accessionYP_271233 
Protein GI71279231 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.589352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTA ACTCAACTAA GCAACATGGA TTTACCCTGA TTGAAGTTAT GTTGGCAATG 
GCTGTTTTCG CTATTGCTGG TGTTGCACTG CTCGGTGTTG CCGATAATAA TTATCGTCAT 
ATTAGTCATC TAGAAGAGCA AATGTTTGCT AATTGGGTCG CATCGAACCA ACTTGTTGAA 
GTGAGTTTAG ATAAAACTTG GCCGCCAAAA AATAACCGCA AAGGCAAAGT TGAGATGGCG 
GGTAGAACCT GGTATTGGCA GCAGAAGGTT ATTAAAACAG CGAATAAAGA GCTGCGTGCC 
GTGAATATGC AGGTTCGACT AAATGAGGAT GATGAGTTAG TAAGTGCTAG CTTATTGACT 
TACCTTGCTC AGGATAAACC CTGA
 
Protein sequence
MMINSTKQHG FTLIEVMLAM AVFAIAGVAL LGVADNNYRH ISHLEEQMFA NWVASNQLVE 
VSLDKTWPPK NNRKGKVEMA GRTWYWQQKV IKTANKELRA VNMQVRLNED DELVSASLLT 
YLAQDKP